Aliases for LOC105377519 Gene

Subcategory (RNA class) for LOC105377519 Gene

ncRNA

Aliases for LOC105377519 Gene

  • Uncharacterized LOC105377519 3

External Ids for LOC105377519 Gene

Previous GeneCards Identifiers for LOC105377519 Gene

  • GC04U902218

Summaries for LOC105377519 Gene

GeneCards Summary for LOC105377519 Gene

LOC105377519 (Uncharacterized LOC105377519) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105377519 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105377519 Gene

Genomics for LOC105377519 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105377519 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J165348 Enhancer 0.6 Ensembl 600.7 +0.8 806 0.8 TCF12 NCOR1 CEBPG DPF2 TAL1 HDAC2 NFATC3 CEBPB KDM1A ZNF24 LOC105377519 MSMO1 MIR578 CPE KLHL2
GH04J165323 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -20.1 -20055 10.1 BRCA1 SP1 CREB1 GATAD2A HNRNPL REST TFE3 RFX1 SOX13 IKZF1 MSMO1 lnc-GK3P-6 KLHL2 TMEM192 NACA3P MIR578 RPL21P51 CPE LOC105377519
GH04J165351 Enhancer 0.6 Ensembl 0.7 +4.7 4706 3 GATAD2A CTCF ZNF140 NFIC ZFHX2 IKZF1 EBF1 HOMEZ TFAP4 NFIA KLHL2 MIR578 MSMO1 CPE LOC105377519
GH04J165355 Enhancer 0.7 Ensembl 0.4 +8.0 8006 0.8 GATAD2A CTCF PKNOX1 RXRB REST CEBPA RAD21 CEBPB CREB1 SMC3 MIR578 MSMO1 CPE KLHL2 LOC105377519
GH04J165359 Enhancer 0.7 Ensembl 0.4 +11.6 11605 5.6 IKZF1 JUND EP300 ZNF766 ZXDB CEBPB ZNF316 JUN MAFF MAFK CPE MIR578 MSMO1 LOC105377519
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105377519 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105377519 Gene

Genomic Locations for LOC105377519 Gene
chr4:165,348,195-165,361,512
(GRCh38/hg38)
Size:
13,318 bases
Orientation:
Plus strand

Genomic View for LOC105377519 Gene

Genes around LOC105377519 on UCSC Golden Path with GeneCards custom track
LOC105377519 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105377519 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105377519 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105377519 Gene

Proteins for LOC105377519 Gene

Post-translational modifications for LOC105377519 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105377519 Gene

Domains & Families for LOC105377519 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105377519 Gene

Function for LOC105377519 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105377519 Gene

Localization for LOC105377519 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105377519 Gene

Pathways & Interactions for LOC105377519 Gene

PathCards logo

SuperPathways for LOC105377519 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105377519 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105377519 Gene

Drugs & Compounds for LOC105377519 Gene

No Compound Related Data Available

Transcripts for LOC105377519 Gene

LOC105377519 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105377519 Gene

No ASD Table

Relevant External Links for LOC105377519 Gene

GeneLoc Exon Structure for
LOC105377519

No data available for mRNA/cDNA for LOC105377519 Gene

Expression for LOC105377519 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105377519 Gene

Orthologs for LOC105377519 Gene

No data available for Orthologs and Evolution for LOC105377519 Gene

Paralogs for LOC105377519 Gene

No data available for Paralogs for LOC105377519 Gene

Variants for LOC105377519 Gene

Additional dbSNP identifiers (rs#s) for LOC105377519 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105377519 Gene

Disorders for LOC105377519 Gene

No disorders were found for LOC105377519 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105377519 Gene

Publications for LOC105377519 Gene

No publications were found for LOC105377519 Gene.

No data available for Mastermind for LOC105377519 Gene

Products for LOC105377519 Gene

Sources for LOC105377519 Gene