Aliases for LOC105377299 Gene

Subcategory (RNA class) for LOC105377299 Gene

ncRNA

Aliases for LOC105377299 Gene

  • Uncharacterized LOC105377299 3

External Ids for LOC105377299 Gene

Previous GeneCards Identifiers for LOC105377299 Gene

  • GC04U902328

Summaries for LOC105377299 Gene

GeneCards Summary for LOC105377299 Gene

LOC105377299 (Uncharacterized LOC105377299) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105377299 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105377299 Gene

Genomics for LOC105377299 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105377299 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J078808 Enhancer 0.8 Ensembl dbSUPER 600.7 +0.6 639 2.8 PKNOX1 HDAC1 SOX6 HMBOX1 NR2F1 TAL1 NR2F6 HDAC2 PRDM6 GLIS1 LOC105377299 ENSG00000200998 BMP2K PAQR3
GH04J078812 Enhancer 0.3 Ensembl dbSUPER 600.7 -1.7 -1661 1 LOC105377299 ENSG00000200998 ENSG00000266270 BMP2K PAQR3
GH04J078774 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 +33.5 33477 6.3 CREB1 GATAD2A HNRNPL TEAD4 PRDM10 TFE3 LEF1 SOX13 IKZF1 ZNF692 BMP2K ENSG00000260278 CNOT6L PAQR3 LOC105377299
GH04J078799 Enhancer 0.9 Ensembl dbSUPER 0.4 +9.6 9639 3.6 ZBTB44 CBX3 HMBOX1 RUNX3 ZNF316 ZSCAN5C OSR2 SCRT1 NFIC WT1 ENSG00000200998 PAQR3 LOC105377299 BMP2K
GH04J078783 Enhancer 0.9 ENCODE dbSUPER 0.3 +26.3 26305 1.3 HDAC1 TCF12 EP300 HMBOX1 NFE2 MEF2D NCOR1 FOSL1 ZNF592 BHLHE40 ENSG00000200998 BMP2K LOC105377299 PAQR3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105377299 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105377299 Gene

Genomic Locations for LOC105377299 Gene
chr4:78,789,444-78,810,840
(GRCh38/hg38)
Size:
21,397 bases
Orientation:
Minus strand

Genomic View for LOC105377299 Gene

Genes around LOC105377299 on UCSC Golden Path with GeneCards custom track
LOC105377299 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105377299 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105377299 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105377299 Gene

Proteins for LOC105377299 Gene

Post-translational modifications for LOC105377299 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105377299 Gene

Domains & Families for LOC105377299 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105377299 Gene

Function for LOC105377299 Gene

Phenotypes From GWAS Catalog for LOC105377299 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105377299 Gene

Localization for LOC105377299 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105377299 Gene

Pathways & Interactions for LOC105377299 Gene

PathCards logo

SuperPathways for LOC105377299 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105377299 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105377299 Gene

Drugs & Compounds for LOC105377299 Gene

No Compound Related Data Available

Transcripts for LOC105377299 Gene

LOC105377299 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105377299 Gene

No ASD Table

Relevant External Links for LOC105377299 Gene

GeneLoc Exon Structure for
LOC105377299

No data available for mRNA/cDNA for LOC105377299 Gene

Expression for LOC105377299 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105377299 Gene

Orthologs for LOC105377299 Gene

No data available for Orthologs and Evolution for LOC105377299 Gene

Paralogs for LOC105377299 Gene

No data available for Paralogs for LOC105377299 Gene

Variants for LOC105377299 Gene

Additional dbSNP identifiers (rs#s) for LOC105377299 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105377299 Gene

Disorders for LOC105377299 Gene

No disorders were found for LOC105377299 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105377299 Gene

Publications for LOC105377299 Gene

No publications were found for LOC105377299 Gene.

No data available for Mastermind for LOC105377299 Gene

Products for LOC105377299 Gene

Sources for LOC105377299 Gene