Aliases for LOC105376917 Gene

Subcategory (RNA class) for LOC105376917 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for LOC105376917 Gene

  • Uncharacterized LOC105376917 3
  • NONHSAG025304 92
  • Lnc-ZNF98-9 168

External Ids for LOC105376917 Gene

Previous GeneCards Identifiers for LOC105376917 Gene

  • GC19U902029
  • GC19M022455
  • GC19M022849

Summaries for LOC105376917 Gene

GeneCards Summary for LOC105376917 Gene

LOC105376917 (Uncharacterized LOC105376917) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105376917 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376917 Gene

Genomics for LOC105376917 Gene

GeneHancer (GH) Regulatory Elements for LOC105376917 Gene

Promoters and enhancers for LOC105376917 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J022531 Promoter/Enhancer 0.6 Ensembl ENCODE 500.7 +0.2 165 2 SP2 LINC01233 LOC105376917 ZNF98 ENSG00000270317 LOC101929124 lnc-ZNF492-2 NONHSAG045689.2-002
GH19J022526 Promoter/Enhancer 0.5 Ensembl ENCODE 0.4 +5.1 5127 2.2 LOC101929124 LINC01233 ENSG00000270317 piR-38580-143 ZNF98 LOC105376917 lnc-ZNF492-2 NONHSAG045689.2-002
GH19J022528 Enhancer 0.2 ENCODE 0.7 +2.7 2739 2.5 LOC101929124 LINC01233 ZNF98 LOC105376917 lnc-ZNF492-2 NONHSAG045689.2-002
GH19J022525 Enhancer 0.2 ENCODE 0.4 +6.5 6492 0.2 LOC101929124 piR-38580-143 ZNF98 LOC105376917 lnc-ZNF492-2 NONHSAG045689.2-002
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376917 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105376917 Gene

Genomic Locations for LOC105376917 Gene
chr19:22,435,662-22,532,566
(GRCh38/hg38)
Size:
96,905 bases
Orientation:
Minus strand

Genomic View for LOC105376917 Gene

Genes around LOC105376917 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376917 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376917 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376917 Gene

Proteins for LOC105376917 Gene

Post-translational modifications for LOC105376917 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376917 Gene

Domains & Families for LOC105376917 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376917 Gene

Function for LOC105376917 Gene

Phenotypes From GWAS Catalog for LOC105376917 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376917 Gene

Localization for LOC105376917 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376917 Gene

Pathways & Interactions for LOC105376917 Gene

PathCards logo

SuperPathways for LOC105376917 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105376917 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105376917 Gene

Drugs & Compounds for LOC105376917 Gene

No Compound Related Data Available

Transcripts for LOC105376917 Gene

mRNA/cDNA for LOC105376917 Gene

4 RNACentral transcripts :
2 REFSEQ mRNAs :
1 NONCODE transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376917 Gene

No ASD Table

Relevant External Links for LOC105376917 Gene

GeneLoc Exon Structure for
LOC105376917

Expression for LOC105376917 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376917 Gene

Orthologs for LOC105376917 Gene

No data available for Orthologs and Evolution for LOC105376917 Gene

Paralogs for LOC105376917 Gene

No data available for Paralogs for LOC105376917 Gene

Variants for LOC105376917 Gene

Additional dbSNP identifiers (rs#s) for LOC105376917 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376917 Gene

Disorders for LOC105376917 Gene

No disorders were found for LOC105376917 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376917 Gene

Publications for LOC105376917 Gene

No publications were found for LOC105376917 Gene.

No data available for Mastermind for LOC105376917 Gene

Products for LOC105376917 Gene

Sources for LOC105376917 Gene