Aliases for LOC105376808 Gene

Subcategory (RNA class) for LOC105376808 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105376808 Gene

  • Uncharacterized LOC105376808 3

External Ids for LOC105376808 Gene

Previous GeneCards Identifiers for LOC105376808 Gene

  • GC01U904687

Summaries for LOC105376808 Gene

GeneCards Summary for LOC105376808 Gene

LOC105376808 (Uncharacterized LOC105376808) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376808 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376808 Gene

Genomics for LOC105376808 Gene

GeneHancer (GH) Regulatory Elements for LOC105376808 Gene

Promoters and enhancers for LOC105376808 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J017134 Enhancer 0.3 Ensembl 750.6 -1.4 -1403 0.2 ZSCAN5C ZNF48 HSALNG0001257 LOC105376808 PADI1 SDHB HSALNG0001256 piR-52848
GH01J017126 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 -6.9 -6855 3.7 ZNF121 ZBTB33 SP1 MAFK SP7 ZNF687 PRDM1 IKZF1 POLR2A BRCA1 PADI1 PADI3 SDHB CROCC PADI2 PADI4 piR-52848 LOC105376808
GH01J017125 Enhancer 1 ENCODE dbSUPER 0.4 -9.8 -9763 0.2 CTCF FOXA1 MYC CC2D1A RAD21 ZNF652 SP1 ZSCAN21 KLF14 ARID2 piR-52848 SDHB PADI3 LOC105376808
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376808 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105376808 Gene

Genomic Locations for LOC105376808 Gene
chr1:17,135,704-17,138,955
(GRCh38/hg38)
Size:
3,252 bases
Orientation:
Plus strand

Genomic View for LOC105376808 Gene

Genes around LOC105376808 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376808 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376808 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376808 Gene

Proteins for LOC105376808 Gene

Post-translational modifications for LOC105376808 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376808 Gene

Domains & Families for LOC105376808 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376808 Gene

Function for LOC105376808 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376808 Gene

Localization for LOC105376808 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376808 Gene

Pathways & Interactions for LOC105376808 Gene

PathCards logo

SuperPathways for LOC105376808 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105376808 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105376808 Gene

Drugs & Compounds for LOC105376808 Gene

No Compound Related Data Available

Transcripts for LOC105376808 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376808 Gene

No ASD Table

Relevant External Links for LOC105376808 Gene

GeneLoc Exon Structure for
LOC105376808

No data available for mRNA/cDNA for LOC105376808 Gene

Expression for LOC105376808 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376808 Gene

Orthologs for LOC105376808 Gene

No data available for Orthologs and Evolution for LOC105376808 Gene

Paralogs for LOC105376808 Gene

No data available for Paralogs for LOC105376808 Gene

Variants for LOC105376808 Gene

Sequence variations from dbSNP and Humsavar for LOC105376808 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000025618 -- 17,137,187(+) A/C intron_variant
rs1000055016 -- 17,137,387(+) T/A intron_variant
rs1000275785 -- 17,138,172(+) C/G intron_variant
rs1001063330 -- 17,138,690(+) G/A non_coding_transcript_variant
rs1001455975 -- 17,139,038(+) G/A downstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376808 Gene

Disorders for LOC105376808 Gene

No disorders were found for LOC105376808 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376808 Gene

Publications for LOC105376808 Gene

No publications were found for LOC105376808 Gene.

No data available for External Links for LOC105376808 Gene

Products for LOC105376808 Gene

Sources for LOC105376808 Gene