Aliases for LOC105376805 Gene

Subcategory (RNA class) for LOC105376805 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105376805 Gene

  • Uncharacterized LOC105376805 3

External Ids for LOC105376805 Gene

Previous GeneCards Identifiers for LOC105376805 Gene

  • GC01U904791

Summaries for LOC105376805 Gene

GeneCards Summary for LOC105376805 Gene

LOC105376805 (Uncharacterized LOC105376805) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376805 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376805 Gene

Genomics for LOC105376805 Gene

GeneHancer (GH) Regulatory Elements for LOC105376805 Gene

Promoters and enhancers for LOC105376805 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J016888 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 +0.2 185 2.2 ZBTB6 L3MBTL2 POU5F1 POLR2A SP1 MAFK GLIS2 RXRA ZBTB8A PRDM10 ENSG00000235241 ENSG00000238142 LOC105376805 TRN-GTT4-1 lnc-PADI1-5 piR-59258 CROCC MFAP2 CROCCP2 CROCCP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376805 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105376805 Gene

Genomic Locations for LOC105376805 Gene
chr1:16,888,538-16,889,686
(GRCh38/hg38)
Size:
1,149 bases
Orientation:
Minus strand

Genomic View for LOC105376805 Gene

Genes around LOC105376805 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376805 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376805 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376805 Gene

Proteins for LOC105376805 Gene

Post-translational modifications for LOC105376805 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376805 Gene

Domains & Families for LOC105376805 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376805 Gene

Function for LOC105376805 Gene

Phenotypes From GWAS Catalog for LOC105376805 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376805 Gene

Localization for LOC105376805 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376805 Gene

Pathways & Interactions for LOC105376805 Gene

PathCards logo

SuperPathways for LOC105376805 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105376805 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105376805 Gene

Drugs & Compounds for LOC105376805 Gene

No Compound Related Data Available

Transcripts for LOC105376805 Gene

mRNA/cDNA for LOC105376805 Gene

(5) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376805 Gene

No ASD Table

Relevant External Links for LOC105376805 Gene

GeneLoc Exon Structure for
LOC105376805

Expression for LOC105376805 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376805 Gene

Orthologs for LOC105376805 Gene

No data available for Orthologs and Evolution for LOC105376805 Gene

Paralogs for LOC105376805 Gene

No data available for Paralogs for LOC105376805 Gene

Variants for LOC105376805 Gene

Sequence variations from dbSNP and Humsavar for LOC105376805 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1002368766 -- 16,888,271(-) G/T downstream_transcript_variant
rs1008507440 -- 16,889,758(-) G/A upstream_transcript_variant
rs1008561206 -- 16,888,554(-) T/C/G non_coding_transcript_variant
rs1010061501 -- 16,891,529(-) T/C upstream_transcript_variant
rs1018645475 -- 16,888,709(-) G/C non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376805 Gene

Disorders for LOC105376805 Gene

No disorders were found for LOC105376805 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376805 Gene

Publications for LOC105376805 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 56

No data available for External Links for LOC105376805 Gene

Products for LOC105376805 Gene

Sources for LOC105376805 Gene