Aliases for LOC105376625 Gene

Subcategory (RNA class) for LOC105376625 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105376625 Gene

  • Uncharacterized LOC105376625 3

External Ids for LOC105376625 Gene

Previous GeneCards Identifiers for LOC105376625 Gene

  • GC11U902345

Summaries for LOC105376625 Gene

GeneCards Summary for LOC105376625 Gene

LOC105376625 (Uncharacterized LOC105376625) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376625 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376625 Gene

Genomics for LOC105376625 Gene

GeneHancer (GH) Regulatory Elements for LOC105376625 Gene

Promoters and enhancers for LOC105376625 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J034824 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 750.6 -0.1 -68 3 MLX RBPJ NR2F6 MIXL1 TEAD4 RERE ELF3 TFE3 CEBPG CBFA2T2 LOC105376625 ELF5 EHF APIP PDHX lnc-APIP-3 LOC102723568
GH11J034825 Enhancer 0.3 Ensembl dbSUPER 750.6 +1.8 1833 0.4 LOC105376625 EHF piR-57461-030 lnc-APIP-3 LOC102723568
GH11J034830 Enhancer 0.6 Ensembl 0.6 -4.7 -4667 0.6 ZKSCAN8 CAVIN1 ZNF740 GTF2A2 ZNF592 ATF2 GLIS1 ZEB2 IRF9 CBFA2T3 NAT10 EHF PDHX LOC105376625 lnc-APIP-3 LOC102723568
GH11J034823 Enhancer 0.5 Ensembl 0.6 +2.4 2434 0.4 RAD21 SP1 RXRA JUND HNF4A HNF4G EHF LOC105376625 piR-57461-030 lnc-APIP-3 LOC102723568
GH11J034850 Enhancer 0.8 Ensembl ENCODE 0.3 -24.5 -24467 0.6 REST PKNOX1 CEBPB HDAC1 KLF4 EP300 STAT3 FOSL1 CEBPG IKZF1 APIP PDHX lnc-APIP-3 LOC105376625 LOC102723568
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376625 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105376625 Gene

Genomic Locations for LOC105376625 Gene
chr11:34,824,571-34,825,834
(GRCh38/hg38)
Size:
1,264 bases
Orientation:
Minus strand

Genomic View for LOC105376625 Gene

Genes around LOC105376625 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376625 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376625 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376625 Gene

Proteins for LOC105376625 Gene

Post-translational modifications for LOC105376625 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376625 Gene

Domains & Families for LOC105376625 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376625 Gene

Function for LOC105376625 Gene

Phenotypes From GWAS Catalog for LOC105376625 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376625 Gene

Localization for LOC105376625 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376625 Gene

Pathways & Interactions for LOC105376625 Gene

PathCards logo

SuperPathways for LOC105376625 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105376625 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105376625 Gene

Drugs & Compounds for LOC105376625 Gene

No Compound Related Data Available

Transcripts for LOC105376625 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376625 Gene

No ASD Table

Relevant External Links for LOC105376625 Gene

GeneLoc Exon Structure for
LOC105376625

No data available for mRNA/cDNA for LOC105376625 Gene

Expression for LOC105376625 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376625 Gene

Orthologs for LOC105376625 Gene

No data available for Orthologs and Evolution for LOC105376625 Gene

Paralogs for LOC105376625 Gene

No data available for Paralogs for LOC105376625 Gene

Variants for LOC105376625 Gene

Sequence variations from dbSNP and Humsavar for LOC105376625 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000960719 -- 34,826,117(-) T/C upstream_transcript_variant
rs1001509348 -- 34,827,266(-) C/T upstream_transcript_variant
rs1001561532 -- 34,827,074(-) G/A upstream_transcript_variant
rs1001671120 -- 34,826,046(-) A/C upstream_transcript_variant
rs1001744732 -- 34,825,837(-) C/T non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376625 Gene

Disorders for LOC105376625 Gene

No disorders were found for LOC105376625 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376625 Gene

Publications for LOC105376625 Gene

No publications were found for LOC105376625 Gene.

No data available for External Links for LOC105376625 Gene

Products for LOC105376625 Gene

Sources for LOC105376625 Gene