Aliases for LOC105376624 Gene

Subcategory (RNA class) for LOC105376624 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105376624 Gene

  • Uncharacterized LOC105376624 3

External Ids for LOC105376624 Gene

Previous GeneCards Identifiers for LOC105376624 Gene

  • GC11U902310

Summaries for LOC105376624 Gene

GeneCards Summary for LOC105376624 Gene

LOC105376624 (Uncharacterized LOC105376624) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376624 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376624 Gene

Genomics for LOC105376624 Gene

GeneHancer (GH) Regulatory Elements for LOC105376624 Gene

Promoters and enhancers for LOC105376624 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J034863 Enhancer 0.6 Ensembl 0.4 +9.9 9882 3.2 L3MBTL2 MAFK CBFA2T2 TRIM24 IKZF1 ZNF316 NFE2 ZNF10 MAFG CEBPG APIP PDHX LOC105376624 lnc-APIP-3 LOC102723568
GH11J034854 Enhancer 0.8 Ensembl ENCODE 0.3 +20.2 20183 1.8 FOXA1 CC2D1A SP1 CTCF TRIM24 IKZF1 REST FOXA2 NFE2 FOXK2 APIP lnc-APIP-3 LOC105376624 LOC105376625 LOC102723568
GH11J034899 Enhancer 0.6 ENCODE 0.3 -23.9 -23946 0.2 ZNF362 CTCF ZNF384 ARID2 REST ZNF316 MAFG RAD21 SMC3 ZBTB33 piR-48393-001 MIR1343 APIP LOC105376624
GH11J034886 Enhancer 0.5 Ensembl 0.4 -11.7 -11717 0.4 CEBPG PRDM10 CEBPB GATA3 JUND APIP PDHX EHF LOC105376624 piR-48393-001
GH11J034859 Enhancer 0.5 Ensembl 0.4 +15.7 15682 0.4 HLF SP1 CEBPA GATA3 HNF4A RXRA lnc-APIP-3 PDHX EHF ENSG00000255542 SLC1A2 MIR1343 APIP LOC105376624 LOC102723568
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376624 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105376624 Gene

Genomic Locations for LOC105376624 Gene
chr11:34,853,602-34,875,283
(GRCh38/hg38)
Size:
21,682 bases
Orientation:
Minus strand

Genomic View for LOC105376624 Gene

Genes around LOC105376624 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376624 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376624 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376624 Gene

Proteins for LOC105376624 Gene

Post-translational modifications for LOC105376624 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376624 Gene

Domains & Families for LOC105376624 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376624 Gene

Function for LOC105376624 Gene

Phenotypes From GWAS Catalog for LOC105376624 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376624 Gene

Localization for LOC105376624 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376624 Gene

Pathways & Interactions for LOC105376624 Gene

PathCards logo

SuperPathways for LOC105376624 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105376624 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105376624 Gene

Drugs & Compounds for LOC105376624 Gene

No Compound Related Data Available

Transcripts for LOC105376624 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376624 Gene

No ASD Table

Relevant External Links for LOC105376624 Gene

GeneLoc Exon Structure for
LOC105376624

No data available for mRNA/cDNA for LOC105376624 Gene

Expression for LOC105376624 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376624 Gene

Orthologs for LOC105376624 Gene

No data available for Orthologs and Evolution for LOC105376624 Gene

Paralogs for LOC105376624 Gene

No data available for Paralogs for LOC105376624 Gene

Variants for LOC105376624 Gene

Sequence variations from dbSNP and Humsavar for LOC105376624 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000043317 -- 34,860,113(-) A/T intron_variant
rs1000091254 -- 34,869,995(-) C/G genic_upstream_transcript_variant, intron_variant
rs1000262922 -- 34,866,399(-) G/T genic_upstream_transcript_variant, intron_variant
rs1000376495 -- 34,873,119(-) C/T genic_upstream_transcript_variant, intron_variant
rs1000528929 -- 34,862,635(-) C/T genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376624 Gene

Disorders for LOC105376624 Gene

No disorders were found for LOC105376624 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376624 Gene

Publications for LOC105376624 Gene

No publications were found for LOC105376624 Gene.

No data available for External Links for LOC105376624 Gene

Products for LOC105376624 Gene

Sources for LOC105376624 Gene