LOC105376572 Gene (RNA Gene)

Uncharacterized LOC105376572

GC11P016041
GIFtS:
1
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Aliases for LOC105376572 Gene

Data sources for LOC105376572 Gene:

Subcategory (RNA class) for LOC105376572 Gene

ncRNA

Aliases for LOC105376572 Gene

External Ids for LOC105376572 Gene

Previous GeneCards Identifiers for LOC105376572 Gene

  • GC11U902405
  • GC11P016022

Summaries for LOC105376572 Gene

GeneCards Summary for LOC105376572 Gene

LOC105376572 (Uncharacterized LOC105376572) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376572 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376572 Gene

Genomics for LOC105376572 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC105376572 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J016045 Enhancer 0.6 Ensembl 0.4 +5.3 5298 2.4 TAL1 STAT5A TCF12 EGR1 MTA2 ZNF384 TEAD4 ARID1B KDM1A CBFA2T2 ENSG00000254878 LOC105376572 lnc-C11orf58-5 MK280144-068 C11orf58 SOX6 INSC
GH11J016037 Enhancer 0.3 Ensembl 0.7 -2.7 -2701 3.2 RFX1 FOXJ2 LOC105376572 lnc-C11orf58-5 C11orf58 INSC SOX6
GH11J016035 Enhancer 0.3 Ensembl 0.7 -4.7 -4701 0.4 NFE2 MAFG LOC105376572 lnc-C11orf58-5 C11orf58 INSC SOX6
GH11J016034 Enhancer 0.4 FANTOM5 0.4 -7.0 -7043 0.4 CEBPA CEBPB CEBPG SOX6 lnc-C11orf58-5 LOC105376572 C11orf58 INSC
GH11J016049 Enhancer 0.2 Ensembl 0.4 +8.5 8499 0.8 ENSG00000254878 LOC105376572 lnc-C11orf58-5 MK280144-068 lnc-PLEKHA7-7 SOX6 C11orf58 INSC
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376572 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105376572 Gene

Latest Assembly
chr11:16,041,502-16,047,322
(GRCh38/hg38)
Size:
5,821 bases
Orientation:
Plus strand

Genomic View for LOC105376572 Gene

Genes around LOC105376572 on UCSC Golden Path with GeneCards custom track
LOC105376572 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105376572 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376572 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105376572 Gene

Proteins for LOC105376572 Gene

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  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for LOC105376572 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376572 Gene

Domains & Families for LOC105376572 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376572 Gene

Function for LOC105376572 Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376572 Gene

Localization for LOC105376572 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376572 Gene

Pathways & Interactions for LOC105376572 Gene

PathCards logo

SuperPathways for LOC105376572 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105376572 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105376572 Gene

Drugs & Compounds for LOC105376572 Gene

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  1. Drug products for research
No Compound Related Data Available

Transcripts for LOC105376572 Gene

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  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research
LOC105376572 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376572 Gene

No ASD Table

Relevant External Links for LOC105376572 Gene

GeneLoc Exon Structure for
LOC105376572

No data available for mRNA/cDNA for LOC105376572 Gene

Expression for LOC105376572 Gene

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  1. Primer products for research
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376572 Gene

Orthologs for LOC105376572 Gene

No data available for Orthologs and Evolution for LOC105376572 Gene

Paralogs for LOC105376572 Gene

No data available for Paralogs for LOC105376572 Gene

Variants for LOC105376572 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105376572 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376572 Gene

Disorders for LOC105376572 Gene

No disorders were found for LOC105376572 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376572 Gene

Publications for LOC105376572 Gene

No publications were found for LOC105376572 Gene.

No data available for Mastermind for LOC105376572 Gene

Products for LOC105376572 Gene

Sources for LOC105376572 Gene