Aliases for LOC105376568 Gene

Subcategory (RNA class) for LOC105376568 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105376568 Gene

  • Uncharacterized LOC105376568 3

External Ids for LOC105376568 Gene

Previous GeneCards Identifiers for LOC105376568 Gene

  • GC11U902519

Summaries for LOC105376568 Gene

GeneCards Summary for LOC105376568 Gene

LOC105376568 (Uncharacterized LOC105376568) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376568 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376568 Gene

Genomics for LOC105376568 Gene

GeneHancer (GH) Regulatory Elements for LOC105376568 Gene

Promoters and enhancers for LOC105376568 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J015621 Enhancer 1 FANTOM5 Ensembl ENCODE 0.6 -3.3 -3301 11.8 CTCF RAD21 SP7 POLR2A RXRA SP1 NFE2 EZH2 ZNF10 MAFG ENSG00000254789 LOC105376568 LOC102724957 piR-53431-075
GH11J015649 Enhancer 1.1 ENCODE CraniofacialAtlas 0.3 -29.3 -29291 7.1 CTCF RBPJ SMARCE1 CTBP1 MIXL1 ZNF362 ELF1 L3MBTL2 MAX RAD21 LOC105376568 piR-53431-075 LOC102724957
GH11J015618 Enhancer 0.5 ENCODE 0.6 +4.8 4791 0.2 RERE FOXA1 HHEX FOXA2 FOXP1 JUND ENSG00000254789 LOC105376568 LOC102724957
GH11J015577 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.3 +44.8 44790 7 FOXA1 SMARCE1 TEAD4 SP1 MLLT1 CEBPG BACH1 CBFA2T2 SMARCA4 REST lnc-SOX6-6 INSC ENSG00000253072 ENSG00000254789 piR-55985-023 LINC02751 LOC105376568
GH11J015601 Enhancer 0.8 VISTA UCNEbase Ensembl ENCODE 0.3 +20.7 20708 2.2 LOC102724957 piR-58075 ENSG00000254789 LOC105376568 LINC02751
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376568 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105376568 Gene

Genomic Locations for LOC105376568 Gene
chr11:15,571,836-15,623,691
(GRCh38/hg38)
Size:
51,856 bases
Orientation:
Minus strand

Genomic View for LOC105376568 Gene

Genes around LOC105376568 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376568 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376568 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376568 Gene

Proteins for LOC105376568 Gene

Post-translational modifications for LOC105376568 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376568 Gene

Domains & Families for LOC105376568 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376568 Gene

Function for LOC105376568 Gene

Phenotypes From GWAS Catalog for LOC105376568 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376568 Gene

Localization for LOC105376568 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376568 Gene

Pathways & Interactions for LOC105376568 Gene

PathCards logo

SuperPathways for LOC105376568 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105376568 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105376568 Gene

Drugs & Compounds for LOC105376568 Gene

No Compound Related Data Available

Transcripts for LOC105376568 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376568 Gene

No ASD Table

Relevant External Links for LOC105376568 Gene

GeneLoc Exon Structure for
LOC105376568

No data available for mRNA/cDNA for LOC105376568 Gene

Expression for LOC105376568 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376568 Gene

Orthologs for LOC105376568 Gene

No data available for Orthologs and Evolution for LOC105376568 Gene

Paralogs for LOC105376568 Gene

No data available for Paralogs for LOC105376568 Gene

Variants for LOC105376568 Gene

Sequence variations from dbSNP and Humsavar for LOC105376568 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000097562 -- 15,592,070(-) A/G intron_variant
rs1000099118 -- 15,594,527(-) T/G intron_variant
rs1000139171 -- 15,612,019(-) A/G intron_variant
rs1000152449 -- 15,572,340(-) G/A non_coding_transcript_variant
rs1000189244 -- 15,572,606(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376568 Gene

Disorders for LOC105376568 Gene

No disorders were found for LOC105376568 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376568 Gene

Publications for LOC105376568 Gene

No publications were found for LOC105376568 Gene.

No data available for External Links for LOC105376568 Gene

Products for LOC105376568 Gene

Sources for LOC105376568 Gene