Aliases for LOC105376567 Gene

Subcategory (RNA class) for LOC105376567 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105376567 Gene

  • Uncharacterized LOC105376567 3

External Ids for LOC105376567 Gene

Previous GeneCards Identifiers for LOC105376567 Gene

  • GC11U902424

Summaries for LOC105376567 Gene

GeneCards Summary for LOC105376567 Gene

LOC105376567 (Uncharacterized LOC105376567) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376567 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376567 Gene

Genomics for LOC105376567 Gene

GeneHancer (GH) Regulatory Elements for LOC105376567 Gene

Promoters and enhancers for LOC105376567 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J015768 Enhancer 0.6 Ensembl ENCODE 750.6 -0.5 -549 1.9 CTBP1 DPF2 ZNF217 MTA1 SMARCE1 LOC105376567 lnc-INSC-6
GH11J015773 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 0.4 -6.2 -6221 3.8 MAFK POLR2A ZNF316 MAFG RCOR1 GLIS1 ZMYM3 EMSY SMARCA5 C11orf58 SOX6 LOC105376567 lnc-INSC-6
GH11J015770 Enhancer 0.5 Ensembl 0.6 -2.0 -2025 1 RAD21 CTCF SMC3 ZNF143 XRCC5 LOC105376567 lnc-INSC-6
GH11J015750 Enhancer 0.8 UCNEbase 0.4 +17.8 17828 0.3 ZBTB6 SP7 ZIC2 ZBTB8A ARNT SCRT2 SCRT1 ZNF423 RCOR1 GLIS1 ENSG00000254645 LOC105376567 piR-55627-020
GH11J015792 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.3 -25.0 -25025 3 FOS ZNF707 JUN CYP2R1 LOC105376567 lnc-INSC-6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376567 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105376567 Gene

Genomic Locations for LOC105376567 Gene
chr11:15,700,972-15,768,476
(GRCh38/hg38)
Size:
67,505 bases
Orientation:
Minus strand

Genomic View for LOC105376567 Gene

Genes around LOC105376567 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376567 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376567 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376567 Gene

Proteins for LOC105376567 Gene

Post-translational modifications for LOC105376567 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376567 Gene

Domains & Families for LOC105376567 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376567 Gene

Function for LOC105376567 Gene

Phenotypes From GWAS Catalog for LOC105376567 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376567 Gene

Localization for LOC105376567 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376567 Gene

Pathways & Interactions for LOC105376567 Gene

PathCards logo

SuperPathways for LOC105376567 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105376567 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105376567 Gene

Drugs & Compounds for LOC105376567 Gene

No Compound Related Data Available

Transcripts for LOC105376567 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376567 Gene

No ASD Table

Relevant External Links for LOC105376567 Gene

GeneLoc Exon Structure for
LOC105376567

No data available for mRNA/cDNA for LOC105376567 Gene

Expression for LOC105376567 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376567 Gene

Orthologs for LOC105376567 Gene

No data available for Orthologs and Evolution for LOC105376567 Gene

Paralogs for LOC105376567 Gene

No data available for Paralogs for LOC105376567 Gene

Variants for LOC105376567 Gene

Sequence variations from dbSNP and Humsavar for LOC105376567 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000049564 -- 15,720,043(-) T/G genic_upstream_transcript_variant, intron_variant
rs1000064699 -- 15,721,913(-) A/G genic_upstream_transcript_variant, intron_variant
rs1000101930 -- 15,764,976(-) C/T genic_upstream_transcript_variant, intron_variant
rs1000103999 -- 15,727,855(-) C/A genic_upstream_transcript_variant, intron_variant
rs1000183422 -- 15,742,895(-) C/G genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376567 Gene

Disorders for LOC105376567 Gene

No disorders were found for LOC105376567 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376567 Gene

Publications for LOC105376567 Gene

No publications were found for LOC105376567 Gene.

No data available for External Links for LOC105376567 Gene

Products for LOC105376567 Gene

Sources for LOC105376567 Gene