Aliases for LOC105376556 Gene
Subcategory (RNA class) for LOC105376556 Gene
ncRNA
Quality Score for this RNA gene is
13
Aliases for LOC105376556 Gene
- Uncharacterized LOC105376556 3
External Ids for LOC105376556 Gene
- Entrez Gene: 105376556
Previous GeneCards Identifiers for LOC105376556 Gene
- GC11U902585
Summaries for LOC105376556 Gene
GeneCards Summary for LOC105376556 Gene
LOC105376556 (Uncharacterized LOC105376556) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105376556 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105376556 Gene
Genomics for LOC105376556 Gene
GeneHancer (GH) Regulatory Elements for LOC105376556 Gene
Promoters and enhancers for LOC105376556 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH11J012618 | Enhancer | 0.2 | ENCODE | 600.7 | -0.4 | -393 | 0.2 | LOC105376556 TEAD1 GC11P012566 | ||
| GH11J012625 | Enhancer | 0.9 | Ensembl ENCODE | 0.4 | +6.7 | 6669 | 1.7 | BACH1 MAFK TRIM24 SMARCA4 DPF2 RFX1 NFE2L2 ATF1 ZNF24 ZNF316 | LOC105376556 GC11M012658 | |
| GH11J012599 | Enhancer | 1.1 | Ensembl ENCODE | 0.3 | -20.2 | -20201 | 1.8 | CC2D1A ELF3 CTCF MNT CEBPG RERE AHR ZNF24 TFE3 SP1 | TEAD1 ENSG00000254688 LOC105376556 GC11P012566 | |
| GH11J012641 | Enhancer | 0.8 | Ensembl ENCODE | 0.3 | +22.9 | 22896 | 1.6 | EGR1 SOX13 TCF7 ZFHX2 BCL6 SMAD4 DMAP1 NR2F6 TEAD3 HLF | TEAD1 ENSG00000254688 ENSG00000252329 GC11M012658 LOC105376556 | |
| GH11J012600 | Enhancer | 0.7 | Ensembl ENCODE | 0.4 | -18.2 | -18167 | 0.7 | SP1 RXRA RAD21 HNF4A HNF4G | LOC105376556 GC11P012566 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC105376556 on UCSC Golden Path with GeneCards custom track
Genomic Locations for LOC105376556 Gene
Genomic Locations for LOC105376556 Gene
- chr11:12,619,302-12,669,097
- (GRCh38/hg38)
- Size:
- 49,796 bases
- Orientation:
- Plus strand
Genomic View for LOC105376556 Gene
Genes around LOC105376556 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 11p15.3 by Entrez Gene
LOC105376556 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105376556 Gene
Proteins for LOC105376556 Gene
Post-translational modifications for LOC105376556 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105376556
- Origene Custom Protein Services for LOC105376556
No data available for DME Specific Peptides for LOC105376556 Gene
Domains & Families for LOC105376556 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105376556 Gene
Function for LOC105376556 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105376556
-
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376556 Gene
Localization for LOC105376556 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376556 Gene
Transcripts for LOC105376556 Gene
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC105376556 Gene
- GeneLoc Exon Structure for
- LOC105376556
No data available for mRNA/cDNA for LOC105376556 Gene
Expression for LOC105376556 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376556 Gene
Orthologs for LOC105376556 Gene
No data available for Orthologs and Evolution for LOC105376556 Gene
Paralogs for LOC105376556 Gene
No data available for Paralogs for LOC105376556 Gene
Variants for LOC105376556 Gene
| SNP ID | Clin | Chr 11 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000001723 | -- | 12,623,562(+) | T/C | intron_variant | |
| rs1000031949 | -- | 12,619,331(+) | C/G/T | non_coding_transcript_variant | |
| rs1000147618 | -- | 12,619,610(+) | T/C/G | intron_variant | |
| rs1000157631 | -- | 12,629,206(+) | G/T | intron_variant | |
| rs1000161013 | -- | 12,642,190(+) | C/T | downstream_transcript_variant |
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376556 Gene
Disorders for LOC105376556 Gene
No disorders were found for LOC105376556 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376556 Gene
Publications for LOC105376556 Gene
No publications were found for LOC105376556 Gene.
No data available for External Links for LOC105376556 Gene
Products for LOC105376556 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
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- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105376556
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Sources for LOC105376556 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) UniGene
- (28) AceView
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) HGMD
- (45) GAD
- (46) BGMUT
- (47) HuGE
- (48) Atlas
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) OCA
- (69) Proteopedia
- (70) MOPED
- (71) neXtProt
- (72) Reactome
- (73) GeneGo (Thomson Reuters)
- (74) fRNAdb
- (75) DISEASES
- (76) SIMAP
- (77) GenomeRNAi
- (78) LifeMap
- (79) miRTarBase
- (80) MalaCards
- (81) Invitrogen
- (82) BitterDB
- (83) ESI-BIO
- (84) RefSeq
- (85) BioSystems
- (86) MaxQB
- (87) IUPHAR
- (88) BioGPS
- (89) Illumina
- (90) COMPARTMENTS
- (91) HOMER
- (92) PaxDb
- (93) ApexBio
- (94) Addgene
- (95) antibodies-online
- (96) CYP
- (97) NONCODE
- (98) SwitchGear Genomics
- (99) TreeFam
- (100) PathCards
- (101) GeneReviews
- (102) GeneTex
- (103) Taconic Biosciences
- (104) GTEx
- (105) ProteomicsDB
- (106) SCBT
- (107) DGIdb
- (108) ClinicalTrials
- (109) FDA Approved Drugs
- (110) RVIS
- (111) SIGNOR
- (112) diseasecard
- (113) NIH Rare Diseases
- (114) Orphanet
- (115) UMLS
- (116) GTR
- (117) Disease Ontology
- (118) Genetics Home Reference
- (119) MeSH
- (120) MedlinePlus
- (121) CDC
- (122) NINDS
- (123) NCBI Bookshelf
- (124) ClinVar
- (125) Gene Damage Index
- (126) ViGene Biosciences
- (127) HPO
- (128) UDN
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- (130) FANTOM5
- (131) ENCODE
- (132) ProSci
- (133) Horizon
- (134) NURSA
- (135) IID
- (136) Cyagen
- (137) VectorBuilder
- (138) SNPedia
- (139) BRCA Exchange
- (140) St John's Lab
- (141) CIViC
- (142) ProteoGenix
- (143) dbSUPER
- (144) TISSUES
- (145) Gene ORGANizer
- (146) abm
- (147) CrownBio
- (148) Human Protein Atlas
- (149) GWAS Catalog
- (150) Monarch Initiative
- (151) DataMed
- (152) HumanCyc
- (153) genomics-online
- (154) UCNEbase
- (155) EPDnew
- (156) Applied Biosystems
- (157) GlyConnect
- (158) Aminode
- (159) GeneCopoeia
- (160) GPS-Prot
- (161) RNACentral
- (162) LncRNADisease
- (163) LOVD
- (164) miR2Disease
- (165) DiseaseEnhancer
- (166) Boster Bio
- (167) Biorbyt
- (168) Biocompare
- (169) Mastermind