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Aliases for LOC105376535 Gene

Subcategory (RNA class) for LOC105376535 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105376535 Gene

  • Uncharacterized LOC105376535 3

External Ids for LOC105376535 Gene

Previous GeneCards Identifiers for LOC105376535 Gene

  • GC11U902460

Summaries for LOC105376535 Gene

GeneCards Summary for LOC105376535 Gene

LOC105376535 (Uncharacterized LOC105376535) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376535 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105376535 Gene

Genomics for LOC105376535 Gene

GeneHancer (GH) Regulatory Elements for LOC105376535 Gene

Promoters and enhancers for LOC105376535 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J007598 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.7 -3.4 -3421 3.6 ZKSCAN8 CBFA2T2 CEBPG TRIM24 SP1 PPARG ZNF644 SMARCA4 KAT8 FOSL2 ENSG00000254864 PPFIBP2 OLFML1 LOC105376535 GC11P007617
GH11J007571 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.3 +21.3 21269 9.3 CTCF ELF3 POLR2A CEBPG RERE TFE3 SP7 RELA SP1 HNF1A PPFIBP2 OLFML1 OVCH2 NLRP10 ENSG00000254864 LOC105376535
GH11J007589 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.7 +3.0 2959 8.4 SP1 POLR2A ZIC2 CTBP1 JUND PKNOX1 ATF3 ZNF217 DPF2 ZFHX2 PPFIBP2 ENSG00000254864 OLFML1 CYB5R2 LOC105376535
GH11J007602 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 0.4 -8.9 -8927 7.3 ELF3 CBFA2T2 NCOA3 KLF14 EGR1 SMARCA4 CREB1 PKNOX1 GATAD2A REST STK33 LOC105376535 GC11P007617 PPFIBP2
GH11J007611 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -15.6 -15621 2.4 CEBPG SP1 RXRA CEBPA GATAD2A RXRB FOXA2 IRF2 FOXK2 SOX13 STK33 GC11P007617 LOC105376535 PPFIBP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376535 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105376535 Gene

Genomic Locations for LOC105376535 Gene
chr11:7,571,274-7,597,180
(GRCh38/hg38)
Size:
25,907 bases
Orientation:
Minus strand

Genomic View for LOC105376535 Gene

Genes around LOC105376535 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376535 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376535 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376535 Gene

Proteins for LOC105376535 Gene

Post-translational modifications for LOC105376535 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376535 Gene

Domains & Families for LOC105376535 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105376535 Gene

Function for LOC105376535 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376535 Gene

Localization for LOC105376535 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376535 Gene

Pathways & Interactions for LOC105376535 Gene

PathCards logo

SuperPathways for LOC105376535 Gene

No Data Available

Interacting Proteins for LOC105376535 Gene

Gene Ontology (GO) - Biological Process for LOC105376535 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105376535 Gene

Drugs & Compounds for LOC105376535 Gene

No Compound Related Data Available

Transcripts for LOC105376535 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376535 Gene

No ASD Table

Relevant External Links for LOC105376535 Gene

GeneLoc Exon Structure for
LOC105376535

No data available for mRNA/cDNA for LOC105376535 Gene

Expression for LOC105376535 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376535 Gene

Orthologs for LOC105376535 Gene

No data available for Orthologs and Evolution for LOC105376535 Gene

Paralogs for LOC105376535 Gene

No data available for Paralogs for LOC105376535 Gene

Variants for LOC105376535 Gene

Sequence variations from dbSNP and Humsavar for LOC105376535 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000030660 -- 7,578,183(-) A/G intron_variant
rs1000284086 -- 7,575,889(-) G/A intron_variant
rs1000489892 -- 7,570,451(-) G/C intron_variant
rs1000498463 -- 7,591,561(-) A/C upstream_transcript_variant
rs1000740159 -- 7,580,953(-) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376535 Gene

Disorders for LOC105376535 Gene

No disorders were found for LOC105376535 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376535 Gene

Publications for LOC105376535 Gene

No publications were found for LOC105376535 Gene.

No data available for External Links for LOC105376535 Gene

Products for LOC105376535 Gene

Sources for LOC105376535 Gene

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