Aliases for LOC105376486 Gene

Subcategory (RNA class) for LOC105376486 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105376486 Gene

  • Uncharacterized LOC105376486 3

External Ids for LOC105376486 Gene

Previous GeneCards Identifiers for LOC105376486 Gene

  • GC10U902461

Summaries for LOC105376486 Gene

GeneCards Summary for LOC105376486 Gene

LOC105376486 (Uncharacterized LOC105376486) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376486 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376486 Gene

Genomics for LOC105376486 Gene

GeneHancer (GH) Regulatory Elements for LOC105376486 Gene

Promoters and enhancers for LOC105376486 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J032893 Enhancer 0.7 Ensembl ENCODE 0.6 +2.4 2378 0.8 SIN3A POLR2A MAFK IKZF1 CTCF ZNF143 piR-30350-010 ENSG00000273038 CCDC7 LOC105376486
GH10J032891 Enhancer 0.2 Ensembl 0.6 +4.1 4078 0.6 ENSG00000273038 CCDC7 LOC105376486 piR-30350-010
GH10J032890 Enhancer 0.2 Ensembl 0.4 +5.5 5478 0.6 ENSG00000273038 piR-30350-010 LOC105376486
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376486 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105376486 Gene

Genomic Locations for LOC105376486 Gene
chr10:32,887,259-32,895,979
(GRCh38/hg38)
Size:
8,721 bases
Orientation:
Minus strand

Genomic View for LOC105376486 Gene

Genes around LOC105376486 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376486 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376486 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376486 Gene

Proteins for LOC105376486 Gene

Post-translational modifications for LOC105376486 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376486 Gene

Domains & Families for LOC105376486 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376486 Gene

Function for LOC105376486 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376486 Gene

Localization for LOC105376486 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376486 Gene

Pathways & Interactions for LOC105376486 Gene

PathCards logo

SuperPathways for LOC105376486 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105376486 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105376486 Gene

Drugs & Compounds for LOC105376486 Gene

No Compound Related Data Available

Transcripts for LOC105376486 Gene

mRNA/cDNA for LOC105376486 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376486 Gene

No ASD Table

Relevant External Links for LOC105376486 Gene

GeneLoc Exon Structure for
LOC105376486

Expression for LOC105376486 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376486 Gene

Orthologs for LOC105376486 Gene

No data available for Orthologs and Evolution for LOC105376486 Gene

Paralogs for LOC105376486 Gene

No data available for Paralogs for LOC105376486 Gene

Variants for LOC105376486 Gene

Sequence variations from dbSNP and Humsavar for LOC105376486 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000213025 -- 32,895,366(-) C/G intron_variant
rs1000531958 -- 32,891,785(-) G/A/C intron_variant
rs1000604045 -- 32,895,644(-) T/G non_coding_transcript_variant
rs1000911201 -- 32,890,369(-) GAGAGGA/GA intron_variant
rs1001154984 -- 32,892,027(-) C/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376486 Gene

Disorders for LOC105376486 Gene

No disorders were found for LOC105376486 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376486 Gene

Publications for LOC105376486 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 56

No data available for External Links for LOC105376486 Gene

Products for LOC105376486 Gene

Sources for LOC105376486 Gene