Aliases for LOC105376453 Gene

Subcategory (RNA class) for LOC105376453 Gene

lncRNA

Number of RNA Genes sources:

1 / 14

Aliases for LOC105376453 Gene

  • Uncharacterized LOC105376453 3
  • Lnc-OTUD1-1 168

External Ids for LOC105376453 Gene

Previous GeneCards Identifiers for LOC105376453 Gene

  • GC10U902201

Summaries for LOC105376453 Gene

GeneCards Summary for LOC105376453 Gene

LOC105376453 (Uncharacterized LOC105376453) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105376453 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376453 Gene

Genomics for LOC105376453 Gene

GeneHancer (GH) Regulatory Elements for LOC105376453 Gene

Promoters and enhancers for LOC105376453 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J023340 Enhancer 0.7 Ensembl ENCODE 500.7 -1.2 -1217 1.2 ZNF639 TRIM28 OSR2 ZBTB17 TCF7L2 PRDM6 ZNF518A ZNF366 YY1 PRDM10 LOC105376453 ENSG00000224215 C10orf67 piR-57133-050
GH10J023343 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 0.7 +2.8 2834 3.6 EP300 ZSCAN5C JUND FOS ZNF639 ZIC2 ZBTB10 ZNF423 ZBTB26 TRIM28 C10orf67 ENSG00000224215 LOC105376453
GH10J023338 Enhancer 0.8 Ensembl ENCODE 0.7 -3.2 -3232 2 CTCF JUND CUX1 CTBP1 RAD21 MIER3 EZH2 SCRT1 STAT1 KAT2B ENSG00000224215 SPAG6 LOC105376453 C10orf67 piR-57133-050
GH10J023331 Enhancer 0.8 Ensembl ENCODE 0.4 -10.0 -10038 1.2 JUND FOS EP300 ZNF184 FOSL2 CEBPB JUN STAT3 ZHX1 ZNF366 SPAG6 piR-57133-050 C10orf67 LOC105376453
GH10J023351 Enhancer 0.7 Ensembl ENCODE 0.4 +10.1 10107 1.7 FOS EP300 CREB1 CEBPB JUN ZNF513 JUND STAT3 PRDM6 TAF1 C10orf67 LOC105376453 HSALNG0076691
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376453 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105376453 Gene

Genomic Locations for LOC105376453 Gene
chr10:23,342,233-23,359,066
(GRCh38/hg38)
Size:
16,834 bases
Orientation:
Plus strand

Genomic View for LOC105376453 Gene

Genes around LOC105376453 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376453 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376453 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376453 Gene

Proteins for LOC105376453 Gene

Post-translational modifications for LOC105376453 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376453 Gene

Domains & Families for LOC105376453 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376453 Gene

Function for LOC105376453 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376453 Gene

Localization for LOC105376453 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376453 Gene

Pathways & Interactions for LOC105376453 Gene

PathCards logo

SuperPathways for LOC105376453 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105376453 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105376453 Gene

Drugs & Compounds for LOC105376453 Gene

No Compound Related Data Available

Transcripts for LOC105376453 Gene

mRNA/cDNA for LOC105376453 Gene

3 RNACentral transcripts :
1 REFSEQ mRNAs :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376453 Gene

No ASD Table

Relevant External Links for LOC105376453 Gene

GeneLoc Exon Structure for
LOC105376453

Expression for LOC105376453 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376453 Gene

Orthologs for LOC105376453 Gene

No data available for Orthologs and Evolution for LOC105376453 Gene

Paralogs for LOC105376453 Gene

No data available for Paralogs for LOC105376453 Gene

Variants for LOC105376453 Gene

Additional dbSNP identifiers (rs#s) for LOC105376453 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376453 Gene

Disorders for LOC105376453 Gene

No disorders were found for LOC105376453 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376453 Gene

Publications for LOC105376453 Gene

No publications were found for LOC105376453 Gene.

No data available for Mastermind for LOC105376453 Gene

Products for LOC105376453 Gene

Sources for LOC105376453 Gene