Aliases for LOC105376434 Gene

Subcategory (RNA class) for LOC105376434 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105376434 Gene

  • Uncharacterized LOC105376434 3

External Ids for LOC105376434 Gene

Previous GeneCards Identifiers for LOC105376434 Gene

  • GC10U902291
  • GC10M015173

Summaries for LOC105376434 Gene

GeneCards Summary for LOC105376434 Gene

LOC105376434 (Uncharacterized LOC105376434) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376434 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376434 Gene

Genomics for LOC105376434 Gene

GeneHancer (GH) Regulatory Elements for LOC105376434 Gene

Promoters and enhancers for LOC105376434 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J015211 Enhancer 0.7 ENCODE 750.6 +1.3 1281 0.2 CTCF RAD21 ZNF652 KLF14 PKNOX1 REST TCF7L2 PRDM10 ATF1 GATAD2A LOC105376434 NONHSAG005304.2 LOC105376433
GH10J015209 Enhancer 0.7 ENCODE 750.6 +1.5 1501 0.2 CTCF RAD21 ZNF652 KLF14 REST TCF7L2 PRDM10 ATF1 GATAD2A ZNF143 LOC105376433 LOC105376434 NONHSAG005304.2
GH10J015210 Enhancer 0.6 ENCODE dbSUPER 750.6 -0.4 -432 2.2 SP7 FOS FOSL1 JUN JUND LOC105376434 NONHSAG005304.2 LOC105376433 ENSG00000232739 FAM171A1
GH10J015207 Enhancer 0.8 FANTOM5 ENCODE 0.6 +2.8 2799 1.9 ZBTB40 ETV6 MLLT1 CREB1 CBFB ZNF37A ZNF10 RUNX3 IRF2 IRF4 LOC105376433 MEIG1 NMT2 CDNF OLAH RPP38-DT LOC105376434
GH10J015199 Enhancer 0.9 ENCODE dbSUPER 0.4 +9.9 9880 4.3 GATA3 TCF7L2 ZBTB33 PRDM1 PPARG CREB1 POLR2A PRDM10 CTBP1 ZNF629 NMT2 RPP38 RPP38-DT GAPDHP45 FAM171A1 LOC105376433 LOC105376434 lnc-NMT2-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376434 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105376434 Gene

Genomic Locations for LOC105376434 Gene
chr10:15,172,897-15,211,298
(GRCh38/hg38)
Size:
38,402 bases
Orientation:
Minus strand

Genomic View for LOC105376434 Gene

Genes around LOC105376434 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376434 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376434 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376434 Gene

Proteins for LOC105376434 Gene

Post-translational modifications for LOC105376434 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376434 Gene

Domains & Families for LOC105376434 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376434 Gene

Function for LOC105376434 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376434 Gene

Localization for LOC105376434 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376434 Gene

Pathways & Interactions for LOC105376434 Gene

PathCards logo

SuperPathways for LOC105376434 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105376434 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105376434 Gene

Drugs & Compounds for LOC105376434 Gene

No Compound Related Data Available

Transcripts for LOC105376434 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376434 Gene

No ASD Table

Relevant External Links for LOC105376434 Gene

GeneLoc Exon Structure for
LOC105376434

No data available for mRNA/cDNA for LOC105376434 Gene

Expression for LOC105376434 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376434 Gene

Orthologs for LOC105376434 Gene

No data available for Orthologs and Evolution for LOC105376434 Gene

Paralogs for LOC105376434 Gene

No data available for Paralogs for LOC105376434 Gene

Variants for LOC105376434 Gene

Sequence variations from dbSNP and Humsavar for LOC105376434 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000040981 -- 15,186,453(-) C/T intron_variant, non_coding_transcript_variant
rs1000109214 -- 15,187,384(-) G/A intron_variant
rs1000302789 -- 15,183,720(-) A/C genic_downstream_transcript_variant, intron_variant
rs1000329693 -- 15,188,388(-) G/A intron_variant
rs1000459035 -- 15,197,405(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376434 Gene

Disorders for LOC105376434 Gene

No disorders were found for LOC105376434 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376434 Gene

Publications for LOC105376434 Gene

No publications were found for LOC105376434 Gene.

No data available for External Links for LOC105376434 Gene

Products for LOC105376434 Gene

Sources for LOC105376434 Gene