Aliases for LOC105376420 Gene

Subcategory (RNA class) for LOC105376420 Gene

ncRNA

Aliases for LOC105376420 Gene

  • Uncharacterized LOC105376420 3

External Ids for LOC105376420 Gene

Previous GeneCards Identifiers for LOC105376420 Gene

  • GC10U902115

Summaries for LOC105376420 Gene

GeneCards Summary for LOC105376420 Gene

LOC105376420 (Uncharacterized LOC105376420) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376420 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376420 Gene

Genomics for LOC105376420 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105376420 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J013414 Enhancer 1 ENCODE dbSUPER 600.7 +1.8 1777 0.3 GATAD2A CTCF RCOR2 PKNOX1 IRF2 PBX2 CEBPA SOX13 ZKSCAN8 FOXA2 ENSG00000233256 LOC105376420 RF00017-594 SEPHS1 BEND7
GH10J013417 Enhancer 1 Ensembl dbSUPER 0.7 +4.4 4400 0.2 LEF1 IKZF1 MTA2 PKNOX1 MTA1 ZNF24 BRD9 SOX6 FOXJ2 EP300 ENSG00000233256 LOC105376420 RF00017-594 lnc-PRPF18-13 SEPHS1 BEND7
GH10J013403 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -8.8 -8800 1.8 LEF1 IKZF1 JUND DDX20 MTA2 PHF21A ZNF24 MTA1 NR2C1 BRD9 SEPHS1 LOC105376420 ENSG00000286514 LOC105376419 BEND7
GH10J013390 Enhancer 0.7 Ensembl dbSUPER 0.4 -22.2 -22200 1.4 MGA EGR1 YY1 ZBTB33 SPI1 HNF4A FOXK2 RXRA PRDM10 L3MBTL2 SEPHS1 ENSG00000286514 LOC105376419 LOC105376420 BEND7
GH10J013382 Enhancer 0.6 ENCODE 0.3 -29.8 -29772 1.7 RNF2 TEAD4 ZNF512 IKZF1 TARDBP PRDM1 MTA1 SCRT2 ZBTB20 ZNF512B ENSG00000286514 LOC105376419 LOC105376420 SEPHS1 BEND7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376420 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105376420 Gene

Genomic Locations for LOC105376420 Gene
chr10:13,413,301-13,423,758
(GRCh38/hg38)
Size:
10,458 bases
Orientation:
Plus strand

Genomic View for LOC105376420 Gene

Genes around LOC105376420 on UCSC Golden Path with GeneCards custom track
LOC105376420 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105376420 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376420 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376420 Gene

Proteins for LOC105376420 Gene

Post-translational modifications for LOC105376420 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376420 Gene

Domains & Families for LOC105376420 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376420 Gene

Function for LOC105376420 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376420 Gene

Localization for LOC105376420 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376420 Gene

Pathways & Interactions for LOC105376420 Gene

PathCards logo

SuperPathways for LOC105376420 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105376420 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105376420 Gene

Drugs & Compounds for LOC105376420 Gene

No Compound Related Data Available

Transcripts for LOC105376420 Gene

LOC105376420 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376420 Gene

No ASD Table

Relevant External Links for LOC105376420 Gene

GeneLoc Exon Structure for
LOC105376420

No data available for mRNA/cDNA for LOC105376420 Gene

Expression for LOC105376420 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376420 Gene

Orthologs for LOC105376420 Gene

No data available for Orthologs and Evolution for LOC105376420 Gene

Paralogs for LOC105376420 Gene

No data available for Paralogs for LOC105376420 Gene

Variants for LOC105376420 Gene

Additional dbSNP identifiers (rs#s) for LOC105376420 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376420 Gene

Disorders for LOC105376420 Gene

No disorders were found for LOC105376420 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376420 Gene

Publications for LOC105376420 Gene

No publications were found for LOC105376420 Gene.

No data available for Mastermind for LOC105376420 Gene

Products for LOC105376420 Gene

Sources for LOC105376420 Gene