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Aliases for LOC105376419 Gene
Subcategory (RNA class) for LOC105376419 Gene
ncRNA
Quality Score for this RNA gene is
13
Aliases for LOC105376419 Gene
- Uncharacterized LOC105376419 3
External Ids for LOC105376419 Gene
- Entrez Gene: 105376419
Previous GeneCards Identifiers for LOC105376419 Gene
- GC10U902202
Summaries for LOC105376419 Gene
GeneCards Summary for LOC105376419 Gene
LOC105376419 (Uncharacterized LOC105376419) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105376419 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376419 Gene
Genomics for LOC105376419 Gene
GeneHancer (GH) Regulatory Elements for LOC105376419 Gene
Promoters and enhancers for LOC105376419 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH10J013382 | Enhancer | 0.6 | ENCODE | 750.6 | +0.5 | 480 | 1.7 | CBFA2T2 SMARCA4 PRDM1 MTA1 IKZF1 RNF2 RXRA TARDBP ZNF512 ZBTB20 | LOC105376419 lnc-MCM10-1 ENSG00000286514 | |
| GH10J013403 | Enhancer | 1.3 | Ensembl ENCODE dbSUPER | 0.3 | +21.5 | 21452 | 1.8 | SMARCE1 CC2D1A ELF1 DACH1 TEAD4 ZNF148 GTF2F1 CSDE1 CBFA2T2 NCOA6 | ENSG00000239665 PRPF18 BTBD7P1 SEPHS1 ENSG00000273474 LOC105376420 ENSG00000286514 LOC105376419 | |
| GH10J013390 | Enhancer | 0.7 | Ensembl dbSUPER | 0.4 | +8.1 | 8052 | 1.4 | L3MBTL2 SP1 EGR1 MGA YY1 ZBTB33 FOXK2 HNF4A RXRA PRDM10 | ENSG00000286514 SEPHS1 LOC105376419 lnc-MCM10-1 | |
| GH10J013386 | Enhancer | 0.3 | Ensembl | 0.6 | +3.5 | 3452 | 0.6 | EGR1 KDM1A | SEPHS1 ENSG00000286514 LOC105376419 lnc-MCM10-1 | |
| GH10J013395 | Enhancer | 0.4 | ENCODE | 0.4 | +12.7 | 12697 | 0.2 | POU5F1 SP1 NANOG | SEPHS1 ENSG00000286514 lnc-MCM10-1 LOC105376419 LOC105376420 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC105376419 on UCSC Golden Path with GeneCards custom track
Genomic Locations for LOC105376419 Gene
Genomic Locations for LOC105376419 Gene
- chr10:13,383,049-13,409,240
- (GRCh38/hg38)
- Size:
- 26,192 bases
- Orientation:
- Plus strand
Genomic View for LOC105376419 Gene
Genes around LOC105376419 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 10p13 by Entrez Gene
LOC105376419 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105376419 Gene
Proteins for LOC105376419 Gene
Post-translational modifications for LOC105376419 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105376419
- Origene Custom Protein Services for LOC105376419
No data available for DME Specific Peptides for LOC105376419 Gene
Domains & Families for LOC105376419 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376419 Gene
Function for LOC105376419 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376419 Gene
Localization for LOC105376419 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376419 Gene
Transcripts for LOC105376419 Gene
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC105376419 Gene
- GeneLoc Exon Structure for
- LOC105376419
No data available for mRNA/cDNA for LOC105376419 Gene
Expression for LOC105376419 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376419 Gene
Orthologs for LOC105376419 Gene
No data available for Orthologs and Evolution for LOC105376419 Gene
Paralogs for LOC105376419 Gene
No data available for Paralogs for LOC105376419 Gene
Variants for LOC105376419 Gene
| SNP ID | Clin | Chr 10 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000012689 | -- | 13,392,287(+) | C/A | intron_variant | |
| rs1000025337 | -- | 13,405,269(+) | A/G | intron_variant | |
| rs1000135271 | -- | 13,394,522(+) | G/T | intron_variant | |
| rs1000215275 | -- | 13,400,109(+) | C/T | non_coding_transcript_variant | |
| rs1000328869 | -- | 13,394,765(+) | C/G | intron_variant |
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376419 Gene
Disorders for LOC105376419 Gene
No disorders were found for LOC105376419 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376419 Gene
Publications for LOC105376419 Gene
No publications were found for LOC105376419 Gene.
No data available for External Links for LOC105376419 Gene
Products for LOC105376419 Gene
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- Custom Antibody Services
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Sources for LOC105376419 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) CGAP SAGE
- (31) SOURCE
- (32) HomoloGene
- (33) PanEnsembl
- (34) euGenes
- (35) SGD
- (36) FlyBase
- (37) WormBase
- (38) Pseudogene
- (39) DGV
- (40) dbSNP
- (41) GenAtlas
- (42) HGMD
- (43) GAD
- (44) BGMUT
- (45) HuGE
- (46) Atlas
- (47) GenBank
- (48) H-invDB
- (49) HORDE
- (50) HUGE
- (51) IMGT
- (52) Leiden
- (53) miRBase
- (54) DME
- (55) OriGene
- (56) PubMed
- (57) R&D Systems
- (58) TGDB
- (59) Tocris
- (60) Abcam
- (61) Novus Biologicals
- (62) ProSpec
- (63) Sino Biological
- (64) GenScript
- (65) Qiagen
- (66) OCA
- (67) Proteopedia
- (68) MOPED
- (69) neXtProt
- (70) Reactome
- (71) GeneGo (Thomson Reuters)
- (72) DISEASES
- (73) SIMAP
- (74) GenomeRNAi
- (75) LifeMap
- (76) miRTarBase
- (77) MalaCards
- (78) Invitrogen
- (79) BitterDB
- (80) ESI-BIO
- (81) RefSeq
- (82) BioSystems
- (83) MaxQB
- (84) IUPHAR
- (85) BioGPS
- (86) Illumina
- (87) COMPARTMENTS
- (88) HOMER
- (89) PaxDb
- (90) ApexBio
- (91) Addgene
- (92) antibodies-online
- (93) CYP
- (94) NONCODE
- (95) TreeFam
- (96) PathCards
- (97) GeneReviews
- (98) GeneTex
- (99) Taconic Biosciences
- (100) GTEx
- (101) ProteomicsDB
- (102) SCBT
- (103) DGIdb
- (104) ClinicalTrials
- (105) RVIS
- (106) SIGNOR
- (107) diseasecard
- (108) NIH Rare Diseases
- (109) Orphanet
- (110) UMLS
- (111) GTR
- (112) Disease Ontology
- (113) Genetics Home Reference
- (114) MeSH
- (115) MedlinePlus
- (116) CDC
- (117) NINDS
- (118) NCBI Bookshelf
- (119) ClinVar
- (120) Gene Damage Index
- (121) HPO
- (122) UDN
- (123) VISTA
- (124) FANTOM5
- (125) ENCODE
- (126) ProSci
- (127) Horizon
- (128) NURSA
- (129) IID
- (130) VectorBuilder
- (131) SNPedia
- (132) BRCA Exchange
- (133) CIViC
- (134) ProteoGenix
- (135) dbSUPER
- (136) TISSUES
- (137) Gene ORGANizer
- (138) abm
- (139) Human Protein Atlas
- (140) GWAS Catalog
- (141) Monarch Initiative
- (142) DataMed
- (143) HumanCyc
- (144) genomics-online
- (145) UCNEbase
- (146) EPDnew
- (147) Applied Biosystems
- (148) GlyConnect
- (149) Aminode
- (150) GeneCopoeia
- (151) GPS-Prot
- (152) RNACentral
- (153) LncRNADisease
- (154) LOVD
- (155) miR2Disease
- (156) DiseaseEnhancer
- (157) Boster Bio
- (158) Biorbyt
- (159) Biocompare
- (160) Mastermind
- (161) CTD^2 Dashboard
- (162) CraniofacialAtlas
- (163) GeneImprint
- (164) Synthego
- (165) Bio Basic
- (166) ENA
- (167) GtRNAdb
- (168) LncBase
- (169) LncBook
- (170) LNCipedia
- (171) LncRNAdb
- (172) Modomics
- (173) PDBe
- (174) Rfam
- (175) SILVA
- (176) snOPY
- (177) SRPDB
- (178) GENCODE
- (179) TarBase
- (180) MyBioSource