Aliases for LOC105376419 Gene

Subcategory (RNA class) for LOC105376419 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105376419 Gene

  • Uncharacterized LOC105376419 3

External Ids for LOC105376419 Gene

Previous GeneCards Identifiers for LOC105376419 Gene

  • GC10U902202

Summaries for LOC105376419 Gene

GeneCards Summary for LOC105376419 Gene

LOC105376419 (Uncharacterized LOC105376419) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376419 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376419 Gene

Genomics for LOC105376419 Gene

GeneHancer (GH) Regulatory Elements for LOC105376419 Gene

Promoters and enhancers for LOC105376419 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J013382 Enhancer 0.6 ENCODE 750.6 +0.5 480 1.7 CBFA2T2 SMARCA4 PRDM1 MTA1 IKZF1 RNF2 RXRA TARDBP ZNF512 ZBTB20 LOC105376419 lnc-MCM10-1 ENSG00000286514
GH10J013403 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +21.5 21452 1.8 SMARCE1 CC2D1A ELF1 DACH1 TEAD4 ZNF148 GTF2F1 CSDE1 CBFA2T2 NCOA6 ENSG00000239665 PRPF18 BTBD7P1 SEPHS1 ENSG00000273474 LOC105376420 ENSG00000286514 LOC105376419
GH10J013390 Enhancer 0.7 Ensembl dbSUPER 0.4 +8.1 8052 1.4 L3MBTL2 SP1 EGR1 MGA YY1 ZBTB33 FOXK2 HNF4A RXRA PRDM10 ENSG00000286514 SEPHS1 LOC105376419 lnc-MCM10-1
GH10J013386 Enhancer 0.3 Ensembl 0.6 +3.5 3452 0.6 EGR1 KDM1A SEPHS1 ENSG00000286514 LOC105376419 lnc-MCM10-1
GH10J013395 Enhancer 0.4 ENCODE 0.4 +12.7 12697 0.2 POU5F1 SP1 NANOG SEPHS1 ENSG00000286514 lnc-MCM10-1 LOC105376419 LOC105376420
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376419 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105376419 Gene

Genomic Locations for LOC105376419 Gene
chr10:13,383,049-13,409,240
(GRCh38/hg38)
Size:
26,192 bases
Orientation:
Plus strand

Genomic View for LOC105376419 Gene

Genes around LOC105376419 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376419 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376419 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376419 Gene

Proteins for LOC105376419 Gene

Post-translational modifications for LOC105376419 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376419 Gene

Domains & Families for LOC105376419 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376419 Gene

Function for LOC105376419 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376419 Gene

Localization for LOC105376419 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376419 Gene

Pathways & Interactions for LOC105376419 Gene

PathCards logo

SuperPathways for LOC105376419 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105376419 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105376419 Gene

Drugs & Compounds for LOC105376419 Gene

No Compound Related Data Available

Transcripts for LOC105376419 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376419 Gene

No ASD Table

Relevant External Links for LOC105376419 Gene

GeneLoc Exon Structure for
LOC105376419

No data available for mRNA/cDNA for LOC105376419 Gene

Expression for LOC105376419 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376419 Gene

Orthologs for LOC105376419 Gene

No data available for Orthologs and Evolution for LOC105376419 Gene

Paralogs for LOC105376419 Gene

No data available for Paralogs for LOC105376419 Gene

Variants for LOC105376419 Gene

Sequence variations from dbSNP and Humsavar for LOC105376419 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000012689 -- 13,392,287(+) C/A intron_variant
rs1000025337 -- 13,405,269(+) A/G intron_variant
rs1000135271 -- 13,394,522(+) G/T intron_variant
rs1000215275 -- 13,400,109(+) C/T non_coding_transcript_variant
rs1000328869 -- 13,394,765(+) C/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376419 Gene

Disorders for LOC105376419 Gene

No disorders were found for LOC105376419 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376419 Gene

Publications for LOC105376419 Gene

No publications were found for LOC105376419 Gene.

No data available for External Links for LOC105376419 Gene

Products for LOC105376419 Gene

Sources for LOC105376419 Gene