Aliases for LOC105376418 Gene

Subcategory (RNA class) for LOC105376418 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105376418 Gene

  • Uncharacterized LOC105376418 3

External Ids for LOC105376418 Gene

Previous GeneCards Identifiers for LOC105376418 Gene

  • GC10U902407

Summaries for LOC105376418 Gene

GeneCards Summary for LOC105376418 Gene

LOC105376418 (Uncharacterized LOC105376418) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376418 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376418 Gene

Genomics for LOC105376418 Gene

GeneHancer (GH) Regulatory Elements for LOC105376418 Gene

Promoters and enhancers for LOC105376418 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J012907 Enhancer 0.3 ENCODE 750.6 +0.4 369 1 PRDM10 LOC105376418 RF00001-036 RNA5SP300 ENSG00000285520 CCDC3
GH10J012902 Enhancer 0.5 ENCODE 0.4 -5.4 -5360 0.2 CTCF RAD21 REST PRDM10 TRIM22 SMC3 ZNF143 ZNF2 HNF4A MIR548Q CCDC3 OPTN LOC105376418 ENSG00000285520
GH10J012909 Enhancer 0.3 Ensembl 0.6 +2.2 2191 0.9 ZIC2 KLF1 CCDC3 LOC105376418 RNA5SP300 RF00001-036 ENSG00000285520
GH10J012934 Enhancer 0.7 FANTOM5 Ensembl 0.3 +27.2 27238 0.4 HLF CEBPA CEBPB JUN JUND FOSL2 FOS GLIS1 CCDC3 piR-57856-001 RNA5SP300 RF00001-036 LOC105376418 ENSG00000285520
GH10J012945 Enhancer 0.8 ENCODE dbSUPER 0.3 +38.6 38588 1.3 TEAD4 CBFA2T2 ATF1 PKNOX1 TCF12 RUNX3 MEF2D JUNB NCOR1 PBX2 ENSG00000228302 CCDC3 piR-57856-001 LOC105376418 ENSG00000285520 piR-40110-038
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376418 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105376418 Gene

Genomic Locations for LOC105376418 Gene
chr10:12,907,636-12,965,475
(GRCh38/hg38)
Size:
57,840 bases
Orientation:
Plus strand

Genomic View for LOC105376418 Gene

Genes around LOC105376418 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376418 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376418 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376418 Gene

Proteins for LOC105376418 Gene

Post-translational modifications for LOC105376418 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376418 Gene

Domains & Families for LOC105376418 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376418 Gene

Function for LOC105376418 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376418 Gene

Localization for LOC105376418 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376418 Gene

Pathways & Interactions for LOC105376418 Gene

PathCards logo

SuperPathways for LOC105376418 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105376418 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105376418 Gene

Drugs & Compounds for LOC105376418 Gene

No Compound Related Data Available

Transcripts for LOC105376418 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376418 Gene

No ASD Table

Relevant External Links for LOC105376418 Gene

GeneLoc Exon Structure for
LOC105376418

No data available for mRNA/cDNA for LOC105376418 Gene

Expression for LOC105376418 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376418 Gene

Orthologs for LOC105376418 Gene

No data available for Orthologs and Evolution for LOC105376418 Gene

Paralogs for LOC105376418 Gene

No data available for Paralogs for LOC105376418 Gene

Variants for LOC105376418 Gene

Sequence variations from dbSNP and Humsavar for LOC105376418 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000053204 -- 12,920,328(+) C/A/T intron_variant
rs1000109010 -- 12,925,546(+) C/A intron_variant
rs1000236116 -- 12,913,016(+) A/G intron_variant
rs1000299781 -- 12,929,533(+) A/C downstream_transcript_variant
rs1000575576 -- 12,907,900(+) AGGAG/AG intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376418 Gene

Disorders for LOC105376418 Gene

No disorders were found for LOC105376418 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376418 Gene

Publications for LOC105376418 Gene

No publications were found for LOC105376418 Gene.

No data available for External Links for LOC105376418 Gene

Products for LOC105376418 Gene

Sources for LOC105376418 Gene