Aliases for LOC105376398 Gene

Data sources for LOC105376398 Gene:

RNA type for LOC105376398 Gene


Aliases for LOC105376398 Gene

External Ids for LOC105376398 Gene

Previous GeneCards Identifiers for LOC105376398 Gene

  • GC10U902396
  • GC10M008572

Summaries for LOC105376398 Gene

GeneCards Summary for LOC105376398 Gene

LOC105376398 (Uncharacterized LOC105376398) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105376398 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376398 Gene

Genomics for LOC105376398 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105376398 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J008592 Enhancer 0.5 ENCODE 250.7 +0.3 315 2.5 JUND SCRT1 ATF4 SCRT2 CEBPG LOC105376398 LOC105376399 GATA3
GH10J008581 Enhancer 0.7 ENCODE 0.4 +12.6 12618 0.5 JUND ZNF217 MBD2 CTBP1 CUX1 NFE2 GATA3 TCF7L2 SMARCE1 DPF2 LOC105376399 LOC105376398 HSALNG0076064 GATA3
GH10J008543 Enhancer 0.9 Ensembl ENCODE 0.2 +50.6 50600 2.3 JUND FEZF1 ZNF217 CTBP1 CUX1 ZNF132 GATA3 TCF7L2 SMARCE1 MAZ KRT8P16 GATA3 HSALNG0076064 LOC105376398
GH10J008588 Enhancer 0.3 Ensembl 0.4 +6.3 6255 0.6 ZNF384 RFX5 LOC105376399 LOC105376398 GATA3
GH10J008502 Enhancer 0.6 UCNEbase Ensembl 0.2 +91.1 91116 3.3 GATA2 ITIH5 KRT8P37 HSALNG0076061 lnc-GATA3-14 LOC105376398 GATA3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376398 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105376398 Gene

Latest Assembly
109,527 bases
Minus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
21,645 bases
Minus strand

Genomic View for LOC105376398 Gene

Genes around LOC105376398 on UCSC Golden Path with GeneCards custom track
LOC105376398 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105376398 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376398 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376398 Gene

Proteins for LOC105376398 Gene

Post-translational modifications for LOC105376398 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376398 Gene

Domains & Families for LOC105376398 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376398 Gene

Function for LOC105376398 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376398 Gene

Localization for LOC105376398 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376398 Gene

Pathways & Interactions for LOC105376398 Gene

PathCards logo

SuperPathways for LOC105376398 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105376398 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105376398 Gene

Drugs & Compounds for LOC105376398 Gene

No Compound Related Data Available

Transcripts for LOC105376398 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC105376398 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000A76781_9606 lncRNA 698 1

RefSeq: NR_134492,

URS0001BCE5F4_9606 lncRNA 2979 1

LncBook: HSALNT0158677,

URS0001BDB662_9606 lncRNA 2628 1

LncBook: HSALNT0158681,

URS0001BF51F2_9606 lncRNA 2452 1

LncBook: HSALNT0158680,

URS0000EB4E73_9606 lncRNA 860 1

LncBook: HSALNT0158682,

LOC105376398 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC105376398 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376398 Gene

No ASD Table

Relevant External Links for LOC105376398 Gene

GeneLoc Exon Structure for

Expression for LOC105376398 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376398 Gene

Orthologs for LOC105376398 Gene

No data available for Orthologs and Evolution for LOC105376398 Gene

Paralogs for LOC105376398 Gene

No data available for Paralogs for LOC105376398 Gene

Variants for LOC105376398 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105376398 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376398 Gene

Disorders for LOC105376398 Gene

No disorders were found for LOC105376398 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376398 Gene

Publications for LOC105376398 Gene

No publications were found for LOC105376398 Gene.

No data available for Mastermind for LOC105376398 Gene

Products for LOC105376398 Gene

Sources for LOC105376398 Gene