Aliases for LOC105376397 Gene

Data sources for LOC105376397 Gene:

RNA type for LOC105376397 Gene

ncRNA

Aliases for LOC105376397 Gene

External Ids for LOC105376397 Gene

Previous GeneCards Identifiers for LOC105376397 Gene

  • GC10U902116

Summaries for LOC105376397 Gene

GeneCards Summary for LOC105376397 Gene

LOC105376397 (Uncharacterized LOC105376397) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376397 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376397 Gene

Genomics for LOC105376397 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105376397 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J008453 Enhancer 0.2 Ensembl 250.7 +0.2 226 1 HSALNG0076057 LOC105376397 HSALNG0076058 lnc-GATA3-14 ENSG00000226990 GATA3
GH10J008444 Enhancer 0.6 Ensembl ENCODE 0.4 +9.3 9326 0.8 SMC3 ZNF189 CTCF RAD21 lnc-GATA3-14 HSALNG0076057 HSALNG0076058 LOC105376397 ENSG00000226990 GATA3
GH10J008438 Enhancer 0.5 Ensembl ENCODE 0.4 +15.6 15571 2.3 SPI1 ZNF680 lnc-GATA3-14 HSALNG0076057 LOC105376397 ENSG00000226990 GATA3
GH10J008446 Enhancer 0.4 Ensembl 0.4 +7.8 7790 1.1 CTCF RAD21 ZNF444 ENSG00000232638 GATA3-AS1 GATA3 HSALNG0076058 HSALNG0076057 lnc-GATA3-14 LOC105376397 ENSG00000226990
GH10J008434 Enhancer 0.4 Ensembl ENCODE 0.4 +18.6 18568 1.3 RFX5 ENSG00000232638 GATA3 GATA3-AS1 lnc-GATA3-14 HSALNG0076057 LOC105376397 ENSG00000226990
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376397 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105376397 Gene

Latest Assembly
chr10:8,435,740-8,454,127
(GRCh38/hg38)
Size:
18,388 bases
Orientation:
Minus strand

Genomic View for LOC105376397 Gene

Genes around LOC105376397 on UCSC Golden Path with GeneCards custom track
LOC105376397 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105376397 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376397 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376397 Gene

Proteins for LOC105376397 Gene

Post-translational modifications for LOC105376397 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376397 Gene

Domains & Families for LOC105376397 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376397 Gene

Function for LOC105376397 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376397 Gene

Localization for LOC105376397 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376397 Gene

Pathways & Interactions for LOC105376397 Gene

PathCards logo

SuperPathways for LOC105376397 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105376397 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105376397 Gene

Drugs & Compounds for LOC105376397 Gene

No Compound Related Data Available

Transcripts for LOC105376397 Gene

LOC105376397 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376397 Gene

No ASD Table

Relevant External Links for LOC105376397 Gene

GeneLoc Exon Structure for
LOC105376397

No data available for mRNA/cDNA for LOC105376397 Gene

Expression for LOC105376397 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376397 Gene

Orthologs for LOC105376397 Gene

No data available for Orthologs and Evolution for LOC105376397 Gene

Paralogs for LOC105376397 Gene

No data available for Paralogs for LOC105376397 Gene

Variants for LOC105376397 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105376397 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376397 Gene

Disorders for LOC105376397 Gene

No disorders were found for LOC105376397 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376397 Gene

Publications for LOC105376397 Gene

No publications were found for LOC105376397 Gene.

No data available for Mastermind for LOC105376397 Gene

Products for LOC105376397 Gene

Sources for LOC105376397 Gene