Aliases for LOC105376381 Gene

Data sources for LOC105376381 Gene:

RNA type for LOC105376381 Gene

lncRNA

Aliases for LOC105376381 Gene

External Ids for LOC105376381 Gene

Previous GeneCards Identifiers for LOC105376381 Gene

  • GC10U902083

Summaries for LOC105376381 Gene

GeneCards Summary for LOC105376381 Gene

LOC105376381 (Uncharacterized LOC105376381) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105376381 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376381 Gene

Genomics for LOC105376381 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105376381 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J005563 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 +1.2 1167 5 MNT FOXA2 ZNF316 NFE2 PRDM10 ETV1 MAFG ZBTB33 EGR1 NRF1 HSALNG0075874 LOC105376381 CALML3 CALML3-AS1 ENSG00000256462 CALML5 HSALNG0075873 ASB13
GH10J005559 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +7.2 7180 3 NCOR1 IKZF1 ARNT NBN SKIL RAD21 HDAC2 ZC3H8 JUND EGR1 HSALNG0075873 CALML3 CALML3-AS1 ENSG00000256462 CALML5 RN7SKP78 lnc-CALML5-7 LOC105376381 ASB13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376381 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105376381 Gene

Latest Assembly
chr10:5,556,987-5,566,881
(GRCh38/hg38)
Size:
9,895 bases
Orientation:
Minus strand

Genomic View for LOC105376381 Gene

Genes around LOC105376381 on UCSC Golden Path with GeneCards custom track
LOC105376381 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105376381 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376381 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376381 Gene

Proteins for LOC105376381 Gene

Post-translational modifications for LOC105376381 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376381 Gene

Domains & Families for LOC105376381 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376381 Gene

Function for LOC105376381 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376381 Gene

Localization for LOC105376381 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376381 Gene

Pathways & Interactions for LOC105376381 Gene

PathCards logo

SuperPathways for LOC105376381 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105376381 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105376381 Gene

Drugs & Compounds for LOC105376381 Gene

No Compound Related Data Available

Transcripts for LOC105376381 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC105376381 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000EF160A_9606 lncRNA 2357 1

Ensembl: ENST00000664654 (view in UCSC) ,

URS00008B7446_9606 lncRNA 686 3

LncBook: HSALNT0158212,

LNCipedia: lnc-CALML5-5:1,

NONCODE: NONHSAT011161.2,

URS00008B3166_9606 lncRNA 361 3

LncBook: HSALNT0158210,

LNCipedia: lnc-CALML5-4:1,

NONCODE: NONHSAT011160.2,

URS00009BFC38_9606 lncRNA 580 2

LncBook: HSALNT0158213,

NONCODE: NONHSAT156590.1,

URS00009B8726_9606 lncRNA 361 2

LncBook: HSALNT0158211,

NONCODE: NONHSAT156589.1,

LOC105376381 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376381 Gene

No ASD Table

Relevant External Links for LOC105376381 Gene

GeneLoc Exon Structure for
LOC105376381

No data available for mRNA/cDNA for LOC105376381 Gene

Expression for LOC105376381 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376381 Gene

Orthologs for LOC105376381 Gene

Evolution for LOC105376381 Gene

ENSEMBL:
Gene Tree for LOC105376381 (if available)
TreeFam:
Gene Tree for LOC105376381 (if available)

No data available for Orthologs for LOC105376381 Gene

Paralogs for LOC105376381 Gene

No data available for Paralogs for LOC105376381 Gene

Variants for LOC105376381 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105376381 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376381 Gene

Disorders for LOC105376381 Gene

No disorders were found for LOC105376381 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376381 Gene

Publications for LOC105376381 Gene

No publications were found for LOC105376381 Gene.

No data available for Mastermind for LOC105376381 Gene

Products for LOC105376381 Gene

Sources for LOC105376381 Gene