Aliases for LOC105376360 Gene

Subcategory (RNA class) for LOC105376360 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC105376360 Gene

  • Uncharacterized LOC105376360 3
  • NONHSAG005033 92
  • HSALNG0075676 167
  • Lnc-PFKP-11 168

External Ids for LOC105376360 Gene

Previous GeneCards Identifiers for LOC105376360 Gene

  • GC10U902415
  • GC10P003748

Summaries for LOC105376360 Gene

GeneCards Summary for LOC105376360 Gene

LOC105376360 (Uncharacterized LOC105376360) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105376360 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376360 Gene

Genomics for LOC105376360 Gene

GeneHancer (GH) Regulatory Elements for LOC105376360 Gene

Promoters and enhancers for LOC105376360 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J003314 Enhancer 1.1 Ensembl ENCODE 0.7 -4.2 -4212 1.8 ZSCAN5C ZNF300 RBAK FOS ZNF639 ZNF354C ZNF10 REST ZBTB10 ZNF623 LOC105376356 lnc-PITRM1-4 PITRM1-AS1 PITRM1 LOC105376360 lnc-PFKP-29
GH10J003365 Enhancer 1 Ensembl ENCODE 0.3 +47.2 47205 1.4 TCF12 TCF7 CUX1 SKI TEAD1 TBX3 ZKSCAN8 CTBP1 FOXA2 FOSL2 LOC105376357 piR-53063-019 LOC105376360 lnc-PFKP-29
GH10J003326 Enhancer 0.5 Ensembl 0.4 +8.3 8306 2 ATF2 RBM25 ESRRA NR2C1 NR2F1 NR2F6 ATF7 ZSCAN4 NR2C2 ENSG00000229672 LOC105376360 piR-53063-019 lnc-PFKP-29 LOC105376357
GH10J003323 Enhancer 0.5 Ensembl ENCODE 0.4 +5.7 5706 2 FOS STAT3 ENSG00000229672 piR-53063-019 LOC105376360 lnc-PFKP-29 LOC105376357
GH10J003329 Enhancer 0.6 Ensembl 0.4 +12.1 12106 2.8 EP300 FOS RFX1 CREB1 CEBPB ZFHX2 BHLHE40 MYC MAX POLR2A LOC105376360 piR-53063-019 lnc-PFKP-29 LOC105376357
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376360 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105376360 Gene

Genomic Locations for LOC105376360 Gene
chr10:3,318,695-3,753,226
(GRCh38/hg38)
Size:
434,532 bases
Orientation:
Plus strand

Genomic View for LOC105376360 Gene

Genes around LOC105376360 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376360 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376360 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376360 Gene

Proteins for LOC105376360 Gene

Post-translational modifications for LOC105376360 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376360 Gene

Domains & Families for LOC105376360 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376360 Gene

Function for LOC105376360 Gene

Phenotypes From GWAS Catalog for LOC105376360 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376360 Gene

Localization for LOC105376360 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376360 Gene

Pathways & Interactions for LOC105376360 Gene

PathCards logo

SuperPathways for LOC105376360 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105376360 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105376360 Gene

Drugs & Compounds for LOC105376360 Gene

No Compound Related Data Available

Transcripts for LOC105376360 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376360 Gene

No ASD Table

Relevant External Links for LOC105376360 Gene

GeneLoc Exon Structure for
LOC105376360

Expression for LOC105376360 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376360 Gene

Orthologs for LOC105376360 Gene

No data available for Orthologs and Evolution for LOC105376360 Gene

Paralogs for LOC105376360 Gene

No data available for Paralogs for LOC105376360 Gene

Variants for LOC105376360 Gene

Additional dbSNP identifiers (rs#s) for LOC105376360 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376360 Gene

Disorders for LOC105376360 Gene

No disorders were found for LOC105376360 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376360 Gene

Publications for LOC105376360 Gene

  1. Developmental changes in the transcriptome of human cerebral cortex tissue: long noncoding RNA transcripts. (PMID: 23377288) Lipovich L … Wildman DE (Cerebral cortex (New York, N.Y. : 1991) 2014) 3 54
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

No data available for Mastermind for LOC105376360 Gene

Products for LOC105376360 Gene

Sources for LOC105376360 Gene