Aliases for LOC105376279 Gene

Data sources for LOC105376279 Gene:

Subcategory (RNA class) for LOC105376279 Gene

ncRNA

Aliases for LOC105376279 Gene

External Ids for LOC105376279 Gene

Previous GeneCards Identifiers for LOC105376279 Gene

  • GC09U902244

Summaries for LOC105376279 Gene

GeneCards Summary for LOC105376279 Gene

LOC105376279 (Uncharacterized LOC105376279) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376279 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105376279 Gene

Genomics for LOC105376279 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105376279 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J127020 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 +0.9 929 4 BHLHE40 ZNF513 CTBP1 ADNP SMARCE1 RAD51 NRF1 ZNF384 CTCF IKZF1 LOC105376279 RALGPS1 piR-32974 ANGPTL2
GH09J127004 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -16.2 -16156 2 SP1 BCL11A NR2C1 IRF4 TRIM22 EBF1 SMC3 SMARCA5 MAX FOSL1 piR-38351-503 RALGPS1 LOC105376279 ANGPTL2
GH09J127007 Enhancer 0.8 Ensembl dbSUPER 0.4 -13.9 -13855 0.6 BCL11A BHLHE40 IKZF1 BMI1 NR2F1 ATF7 TARDBP IKZF2 ZNF687 MTA2 RALGPS1 piR-38351-503 LOC105376279 ANGPTL2
GH09J127013 Enhancer 0.6 Ensembl ENCODE 0.4 -7.3 -7255 2.2 SCRT1 RCOR1 EGR2 CHD2 ZFHX2 ENSG00000228487 GARNL3 LOC105376279 piR-38351-503 RALGPS1 ANGPTL2
GH09J127027 Enhancer 0.4 Ensembl 0.4 +6.0 6045 0.4 CEBPB USF1 CEBPG RALGPS1 piR-32974 LOC105376279 ANGPTL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376279 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105376279 Gene

Latest Assembly
chr9:127,021,756-127,023,250
(GRCh38/hg38)
Size:
1,495 bases
Orientation:
Plus strand

Genomic View for LOC105376279 Gene

Genes around LOC105376279 on UCSC Golden Path with GeneCards custom track
LOC105376279 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105376279 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376279 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376279 Gene

Proteins for LOC105376279 Gene

Post-translational modifications for LOC105376279 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376279 Gene

Domains & Families for LOC105376279 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105376279 Gene

Function for LOC105376279 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376279 Gene

Localization for LOC105376279 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376279 Gene

Pathways & Interactions for LOC105376279 Gene

PathCards logo

SuperPathways for LOC105376279 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105376279 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105376279 Gene

Drugs & Compounds for LOC105376279 Gene

No Compound Related Data Available

Transcripts for LOC105376279 Gene

LOC105376279 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376279 Gene

No ASD Table

Relevant External Links for LOC105376279 Gene

GeneLoc Exon Structure for
LOC105376279

No data available for mRNA/cDNA for LOC105376279 Gene

Expression for LOC105376279 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376279 Gene

Orthologs for LOC105376279 Gene

No data available for Orthologs and Evolution for LOC105376279 Gene

Paralogs for LOC105376279 Gene

No data available for Paralogs for LOC105376279 Gene

Variants for LOC105376279 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105376279 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376279 Gene

Disorders for LOC105376279 Gene

No disorders were found for LOC105376279 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376279 Gene

Publications for LOC105376279 Gene

No publications were found for LOC105376279 Gene.

No data available for Mastermind for LOC105376279 Gene

Products for LOC105376279 Gene

Sources for LOC105376279 Gene