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Aliases for LOC105376233 Gene

Subcategory (RNA class) for LOC105376233 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105376233 Gene

  • Uncharacterized LOC105376233 3

External Ids for LOC105376233 Gene

Previous GeneCards Identifiers for LOC105376233 Gene

  • GC09U902621

Summaries for LOC105376233 Gene

GeneCards Summary for LOC105376233 Gene

LOC105376233 (Uncharacterized LOC105376233) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376233 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105376233 Gene

Genomics for LOC105376233 Gene

GeneHancer (GH) Regulatory Elements for LOC105376233 Gene

Promoters and enhancers for LOC105376233 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J115261 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 600.7 -0.3 -293 3.3 NFIB MAFK POLR2A RFX1 REST SP1 ATF3 ZNF580 FOS SCRT1 LOC105376233 TNC DEC1 LOC105376232
GH09J115260 Enhancer 0.5 Ensembl dbSUPER 600.7 +1.6 1626 0.2 CEBPG LOC105376233 ENSG00000234692 DEC1
GH09J115266 Enhancer 0.7 Ensembl ENCODE 0.7 -3.8 -3773 0.6 ZSCAN4 ZNF148 ZNF398 ZNF843 LOC105376233 LOC105376232 DEC1
GH09J115289 Enhancer 0.8 Ensembl ENCODE 0.3 -27.7 -27666 1.1 ZSCAN4 USF1 ZNF366 JUND ZNF513 FEZF1 PRDM6 ZNF362 TNC LOC105376233 LOC105376232 DEC1
GH09J115253 Enhancer 0.5 Ensembl ENCODE 0.4 +7.6 7572 1.9 POLR2A ENSG00000234692 DEC1 LOC105376233
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105376233 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105376233 Gene

Genomic Locations for LOC105376233 Gene
chr9:115,253,243-115,262,527
(GRCh38/hg38)
Size:
9,285 bases
Orientation:
Minus strand

Genomic View for LOC105376233 Gene

Genes around LOC105376233 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376233 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376233 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376233 Gene

Proteins for LOC105376233 Gene

Post-translational modifications for LOC105376233 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376233 Gene

Domains & Families for LOC105376233 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105376233 Gene

Function for LOC105376233 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376233 Gene

Localization for LOC105376233 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376233 Gene

Pathways & Interactions for LOC105376233 Gene

PathCards logo

SuperPathways for LOC105376233 Gene

No Data Available

Interacting Proteins for LOC105376233 Gene

Gene Ontology (GO) - Biological Process for LOC105376233 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105376233 Gene

Drugs & Compounds for LOC105376233 Gene

No Compound Related Data Available

Transcripts for LOC105376233 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376233 Gene

No ASD Table

Relevant External Links for LOC105376233 Gene

GeneLoc Exon Structure for
LOC105376233

No data available for mRNA/cDNA for LOC105376233 Gene

Expression for LOC105376233 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376233 Gene

Orthologs for LOC105376233 Gene

No data available for Orthologs and Evolution for LOC105376233 Gene

Paralogs for LOC105376233 Gene

No data available for Paralogs for LOC105376233 Gene

Variants for LOC105376233 Gene

Sequence variations from dbSNP and Humsavar for LOC105376233 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1000346721 -- 115,251,727(-) T/C non_coding_transcript_variant
rs1000562795 -- 115,258,256(-) T/C intron_variant
rs1000746040 -- 115,251,637(-) G/A non_coding_transcript_variant
rs1000960811 -- 115,258,614(-) T/A/C intron_variant
rs1001068886 -- 115,258,327(-) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376233 Gene

Disorders for LOC105376233 Gene

No disorders were found for LOC105376233 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376233 Gene

Publications for LOC105376233 Gene

No publications were found for LOC105376233 Gene.

No data available for External Links for LOC105376233 Gene

Products for LOC105376233 Gene

Sources for LOC105376233 Gene

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