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Aliases for LOC105375624 Gene

Subcategory (RNA class) for LOC105375624 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105375624 Gene

  • Uncharacterized LOC105375624 3
  • AC103760.1 5

External Ids for LOC105375624 Gene

Previous GeneCards Identifiers for LOC105375624 Gene

  • GC08U902407

Summaries for LOC105375624 Gene

GeneCards Summary for LOC105375624 Gene

LOC105375624 (Uncharacterized LOC105375624) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375624 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375624 Gene

Genomics for LOC105375624 Gene

GeneHancer (GH) Regulatory Elements for LOC105375624 Gene

Promoters and enhancers for LOC105375624 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I086346 Enhancer 0.2 FANTOM5 550.8 -1.2 -1237 0.3 LOC105375624 WWP1 RMDN1 PIR50774
GH08I086507 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.2 -162.9 -162890 2.6 HDGF PKNOX1 ARID4B SIN3A DMAP1 YY1 POLR2B E2F8 ZNF143 ZNF207 RMDN1 WWP1 NTAN1P2 LOC105375624 CPNE3 SLC2A3P4
GH08I086108 Enhancer 1.1 Ensembl ENCODE 10.5 +236.6 236649 1.2 PKNOX1 ATF1 FOXA2 NEUROD1 FOS TSHZ1 MEF2D SMARCA4 PRDM4 WT1 SLC7A13 WWP1 LOC105375624 CA2 CA3-AS1 PSKH2 ENSG00000253675 ATP6V0D2
GH08I086127 Enhancer 0.9 ENCODE 11.7 +217.0 216982 1.7 ELF3 FOXA2 MLX ARID4B DMAP1 RAD21 RARA YY1 ATF7 CREM LOC105375623 LOC105375624 WWP1 ENSG00000253675 PSKH2 ATP6V0D2
GH08I086098 Promoter/Enhancer 0.9 EPDnew Ensembl 10.3 +246.6 246612 0.5 FOSL1 ZNF10 REST ATP6V0D2 WWP1 LOC105375624 PSKH2 ENSG00000253675
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375624 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375624 Gene

Genomic Locations for LOC105375624 Gene
chr8:86,333,274-86,345,460
(GRCh38/hg38)
Size:
12,187 bases
Orientation:
Minus strand
chr8:87,345,503-87,355,543
(GRCh37/hg19)

Genomic View for LOC105375624 Gene

Genes around LOC105375624 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375624 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375624 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375624 Gene

Proteins for LOC105375624 Gene

Post-translational modifications for LOC105375624 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375624 Gene

Domains & Families for LOC105375624 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375624 Gene

Function for LOC105375624 Gene

Phenotypes From GWAS Catalog for LOC105375624 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375624 Gene

Localization for LOC105375624 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375624 Gene

Pathways & Interactions for LOC105375624 Gene

SuperPathways for LOC105375624 Gene

No Data Available

Interacting Proteins for LOC105375624 Gene

Gene Ontology (GO) - Biological Process for LOC105375624 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375624 Gene

Drugs & Compounds for LOC105375624 Gene

No Compound Related Data Available

Transcripts for LOC105375624 Gene

mRNA/cDNA for LOC105375624 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375624 Gene

No ASD Table

Relevant External Links for LOC105375624 Gene

GeneLoc Exon Structure for
LOC105375624

Expression for LOC105375624 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375624 Gene

Orthologs for LOC105375624 Gene

Evolution for LOC105375624 Gene

ENSEMBL:
Gene Tree for LOC105375624 (if available)
TreeFam:
Gene Tree for LOC105375624 (if available)

No data available for Orthologs for LOC105375624 Gene

Paralogs for LOC105375624 Gene

No data available for Paralogs for LOC105375624 Gene

Variants for LOC105375624 Gene

Sequence variations from dbSNP and Humsavar for LOC105375624 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000163182 -- 86,333,993(-) C/A non_coding_transcript_variant
rs1000275425 -- 86,339,352(-) G/A intron_variant
rs1000498105 -- 86,344,137(-) T/C genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000567434 -- 86,345,576(-) A/C upstream_transcript_variant
rs1000727824 -- 86,335,673(-) G/C intron_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375624 Gene

Disorders for LOC105375624 Gene

No disorders were found for LOC105375624 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375624 Gene

Publications for LOC105375624 Gene

No publications were found for LOC105375624 Gene.

Products for LOC105375624 Gene

Sources for LOC105375624 Gene

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