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Aliases for LOC105375622 Gene

Subcategory (RNA class) for LOC105375622 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375622 Gene

  • Uncharacterized LOC105375622 3

External Ids for LOC105375622 Gene

Previous GeneCards Identifiers for LOC105375622 Gene

  • GC08U902170

Summaries for LOC105375622 Gene

GeneCards Summary for LOC105375622 Gene

LOC105375622 (Uncharacterized LOC105375622) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375622 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375622 Gene

Genomics for LOC105375622 Gene

GeneHancer (GH) Regulatory Elements for LOC105375622 Gene

Promoters and enhancers for LOC105375622 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I085861 Enhancer 0.7 ENCODE 550.8 -0.2 -182 1.3 ZNF639 MAFG BACH1 CEBPB CEBPG DPF2 EP300 MAFF ZNF316 NFIC LOC105375622 ENSG00000253154 ATP6V0D2
GH08I085865 Enhancer 0.6 ENCODE 0.8 -4.1 -4144 0.2 FOXA2 RARA FOXA1 JUND GATA3 CUX1 FOS FOSL2 HNF4A LOC105375622 ENSG00000253154 ATP6V0D2
GH08I085864 Enhancer 0.5 ENCODE 0.8 -3.5 -3541 0.8 GATA3 JUND HLF FOSL2 CUX1 CA2 LOC105375622 ENSG00000253154 ATP6V0D2
GH08I085841 Enhancer 1 Ensembl ENCODE 0.4 +19.4 19378 3.1 CLOCK NFIB NEUROD1 SIN3A NFXL1 ZBTB40 FOS ATF7 RCOR1 CEBPB CA2 ENSG00000253154 LOC105375622
GH08I085866 Enhancer 0.6 ENCODE 0.4 -5.7 -5667 1.5 MEIS2 SOX6 TEAD4 TAL1 CBFA2T3 DPF2 FOXA1 TCF12 GATA3 HDAC2 LOC105375622 ENSG00000253154 ATP6V0D2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375622 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375622 Gene

Genomic Locations for LOC105375622 Gene
chr8:85,851,630-85,861,603
(GRCh38/hg38)
Size:
9,974 bases
Orientation:
Minus strand

Genomic View for LOC105375622 Gene

Genes around LOC105375622 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375622 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375622 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375622 Gene

Proteins for LOC105375622 Gene

Post-translational modifications for LOC105375622 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375622 Gene

Domains & Families for LOC105375622 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375622 Gene

Function for LOC105375622 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375622 Gene

Localization for LOC105375622 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375622 Gene

Pathways & Interactions for LOC105375622 Gene

SuperPathways for LOC105375622 Gene

No Data Available

Interacting Proteins for LOC105375622 Gene

Gene Ontology (GO) - Biological Process for LOC105375622 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375622 Gene

Drugs & Compounds for LOC105375622 Gene

No Compound Related Data Available

Transcripts for LOC105375622 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375622 Gene

No ASD Table

Relevant External Links for LOC105375622 Gene

GeneLoc Exon Structure for
LOC105375622

No data available for mRNA/cDNA for LOC105375622 Gene

Expression for LOC105375622 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375622 Gene

Orthologs for LOC105375622 Gene

No data available for Orthologs and Evolution for LOC105375622 Gene

Paralogs for LOC105375622 Gene

No data available for Paralogs for LOC105375622 Gene

Variants for LOC105375622 Gene

Sequence variations from dbSNP and Humsavar for LOC105375622 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1001161666 -- 85,852,866(-) T/C intron_variant
rs1002054649 -- 85,852,755(-) G/A non_coding_transcript_variant
rs1002271789 -- 85,857,190(-) G/C upstream_transcript_variant
rs1002432566 -- 85,851,124(-) C/A downstream_transcript_variant
rs1004287916 -- 85,854,788(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375622 Gene

Disorders for LOC105375622 Gene

No disorders were found for LOC105375622 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375622 Gene

Publications for LOC105375622 Gene

No publications were found for LOC105375622 Gene.

Products for LOC105375622 Gene

Sources for LOC105375622 Gene

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