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Aliases for LOC105375570 Gene

Subcategory (RNA class) for LOC105375570 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105375570 Gene

  • Uncharacterized LOC105375570 3
  • AC074257.1 5

External Ids for LOC105375570 Gene

Previous GeneCards Identifiers for LOC105375570 Gene

  • GC07U904097

Summaries for LOC105375570 Gene

GeneCards Summary for LOC105375570 Gene

LOC105375570 (Uncharacterized LOC105375570) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375570 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375570 Gene

Genomics for LOC105375570 Gene

GeneHancer (GH) Regulatory Elements for LOC105375570 Gene

Promoters and enhancers for LOC105375570 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I151956 Promoter 0.8 EPDnew 565.2 -1.4 -1432 0.1 ZNF189 ZNF629 ZFP37 CREB1 LOC105375570 GALNTL5 LOC105375571 ENSG00000276213
GH07I151957 Enhancer 0.4 ENCODE 557.4 -0.7 -656 0.2 NRF1 NR2F2 LOC105375570 GALNTL5 LOC105375571
GH07I151955 Enhancer 0.3 ENCODE 550.8 -0.3 -316 0.2 NRF1 LOC105375571 LOC105375570 GALNTL5
GH07I151931 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 12.3 +22.4 22362 1.7 PKNOX1 SIN3A BMI1 RAD21 RFX5 ZNF155 ZNF335 ZNF366 RCOR1 ZNF654 PRKAG2 NUB1 GALNTL5 LOC105375570 RNU6-604P LOC644090 ENSG00000244151 KMT2C RHEB ENSG00000222941
GH07I151843 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.9 +110.4 110427 1.4 ELF3 FOXA2 ARID4B SIN3A FOS CREM THAP11 EGR2 SMARCA5 USF2 PRKAG2 PRKAG2-AS1 LOC644090 GALNTL5 LOC105375570 RNU6-604P WDR86 RHEB GC07M151865 GC07M151797
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375570 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375570 Gene

Genomic Locations for LOC105375570 Gene
chr7:151,946,951-151,954,995
(GRCh38/hg38)
Size:
8,045 bases
Orientation:
Minus strand
chr7:151,647,471-151,652,070
(GRCh37/hg19)

Genomic View for LOC105375570 Gene

Genes around LOC105375570 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375570 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375570 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375570 Gene

Proteins for LOC105375570 Gene

Post-translational modifications for LOC105375570 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375570 Gene

Domains & Families for LOC105375570 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375570 Gene

Function for LOC105375570 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375570 Gene

Localization for LOC105375570 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375570 Gene

Pathways & Interactions for LOC105375570 Gene

SuperPathways for LOC105375570 Gene

No Data Available

Interacting Proteins for LOC105375570 Gene

Gene Ontology (GO) - Biological Process for LOC105375570 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375570 Gene

Drugs & Compounds for LOC105375570 Gene

No Compound Related Data Available

Transcripts for LOC105375570 Gene

mRNA/cDNA for LOC105375570 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375570 Gene

No ASD Table

Relevant External Links for LOC105375570 Gene

GeneLoc Exon Structure for
LOC105375570

Expression for LOC105375570 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375570 Gene

Orthologs for LOC105375570 Gene

Evolution for LOC105375570 Gene

ENSEMBL:
Gene Tree for LOC105375570 (if available)
TreeFam:
Gene Tree for LOC105375570 (if available)

No data available for Orthologs for LOC105375570 Gene

Paralogs for LOC105375570 Gene

No data available for Paralogs for LOC105375570 Gene

Variants for LOC105375570 Gene

Sequence variations from dbSNP and Humsavar for LOC105375570 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000508611 -- 151,947,174(-) G/A non_coding_transcript_variant
rs1000721315 -- 151,952,793(-) T/A intron_variant
rs1000913410 -- 151,946,893(-) T/C downstream_transcript_variant
rs1001291047 -- 151,946,484(-) C/T downstream_transcript_variant
rs1001715364 -- 151,951,217(-) G/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375570 Gene

Disorders for LOC105375570 Gene

No disorders were found for LOC105375570 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375570 Gene

Publications for LOC105375570 Gene

No publications were found for LOC105375570 Gene.

Products for LOC105375570 Gene

Sources for LOC105375570 Gene

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