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Aliases for LOC105375566 Gene

Subcategory (RNA class) for LOC105375566 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375566 Gene

  • Uncharacterized LOC105375566 3

External Ids for LOC105375566 Gene

Previous GeneCards Identifiers for LOC105375566 Gene

  • GC07U903945

Summaries for LOC105375566 Gene

GeneCards Summary for LOC105375566 Gene

LOC105375566 (Uncharacterized LOC105375566) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375566 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375566 Gene

Genomics for LOC105375566 Gene

GeneHancer (GH) Regulatory Elements for LOC105375566 Gene

Promoters and enhancers for LOC105375566 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I150780 Enhancer 1 Ensembl ENCODE dbSUPER 550.8 +0.8 795 2.2 ZNF687 RXRA CEBPB CEBPG EBF1 YY1 CEBPA HNF4A LOC105375566 TMEM176B TMEM176A AOC1 BET1P1
GH07I150778 Enhancer 1 Ensembl ENCODE 0.8 +2.8 2807 1.4 ATF1 RB1 ARNT IRF4 RAD21 RFX5 ZNF366 ZNF143 RCOR1 IKZF2 TMEM176B TMEM176A LOC105375566 BET1P1
GH07I150783 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.1 -5133 7 PKNOX1 ATF1 SMAD1 ARNT YY1 TCF12 GATA2 E2F8 ATF7 RXRA TMEM176A TMEM176B AOC1 ENSG00000244151 NUB1 GIMAP1 ZNF862 GIMAP2 AGAP3 GIMAP8
GH07I150753 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +26.7 26731 4.4 CTCF PKNOX1 JUN MAX EBF1 YBX1 BATF RAD21 RELA ZNF366 GIMAP5 GIMAP3P RARRES2 GIMAP2 GIMAP8 TMEM176B TMEM176A GIMAP1 GIMAP7 GIMAP6
GH07I150791 Enhancer 0.5 dbSUPER 0.4 -9.9 -9867 1.7 ZFHX2 RNF2 SMARCA4 ZNF512 EGR2 TMEM176B AOC1 GIMAP1 BET1P1 TMEM176A LOC105375566
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375566 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375566 Gene

Genomic Locations for LOC105375566 Gene
chr7:150,761,587-150,782,108
(GRCh38/hg38)
Size:
20,522 bases
Orientation:
Minus strand

Genomic View for LOC105375566 Gene

Genes around LOC105375566 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375566 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375566 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375566 Gene

Proteins for LOC105375566 Gene

Post-translational modifications for LOC105375566 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375566 Gene

Domains & Families for LOC105375566 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375566 Gene

Function for LOC105375566 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375566 Gene

Localization for LOC105375566 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375566 Gene

Pathways & Interactions for LOC105375566 Gene

SuperPathways for LOC105375566 Gene

No Data Available

Interacting Proteins for LOC105375566 Gene

Gene Ontology (GO) - Biological Process for LOC105375566 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375566 Gene

Drugs & Compounds for LOC105375566 Gene

No Compound Related Data Available

Transcripts for LOC105375566 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375566 Gene

No ASD Table

Relevant External Links for LOC105375566 Gene

GeneLoc Exon Structure for
LOC105375566

No data available for mRNA/cDNA for LOC105375566 Gene

Expression for LOC105375566 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375566 Gene

Orthologs for LOC105375566 Gene

No data available for Orthologs and Evolution for LOC105375566 Gene

Paralogs for LOC105375566 Gene

No data available for Paralogs for LOC105375566 Gene

Variants for LOC105375566 Gene

Sequence variations from dbSNP and Humsavar for LOC105375566 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000012627 -- 150,782,420(-) A/G genic_upstream_transcript_variant, non_coding_transcript_variant, upstream_transcript_variant
rs1000414084 -- 150,762,777(-) G/C genic_downstream_transcript_variant, intron_variant
rs1000418582 -- 150,769,579(-) C/T genic_downstream_transcript_variant, intron_variant
rs1000474930 -- 150,761,714(-) C/G genic_downstream_transcript_variant, intron_variant
rs1000504582 -- 150,774,181(-) G/C genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375566 Gene

Disorders for LOC105375566 Gene

Additional Disease Information for LOC105375566

No disorders were found for LOC105375566 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105375566 Gene

Publications for LOC105375566 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for LOC105375566 Gene

Sources for LOC105375566 Gene

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