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Aliases for LOC105375564 Gene

Subcategory (RNA class) for LOC105375564 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105375564 Gene

  • Uncharacterized LOC105375564 3
  • AC073111.1 5

External Ids for LOC105375564 Gene

Previous GeneCards Identifiers for LOC105375564 Gene

  • GC07U904127

Summaries for LOC105375564 Gene

GeneCards Summary for LOC105375564 Gene

LOC105375564 (Uncharacterized LOC105375564) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375564 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375564 Gene

Genomics for LOC105375564 Gene

GeneHancer (GH) Regulatory Elements for LOC105375564 Gene

Promoters and enhancers for LOC105375564 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I150319 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 11.9 +61.0 60970 6.6 MLX DMAP1 IRF4 YY1 E2F8 SP3 MEF2D GLIS1 NBN NR2C1 LRRC61 ACTR3C GC07P150324 ENSG00000244151 ZNF775 LOC105375564 ZNF767P ZNF862 ZNF746 GC07P150294
GH07I150398 Promoter/Enhancer 2 Ensembl ENCODE dbSUPER 12.5 -20.2 -20159 11.2 MLX FEZF1 DMAP1 IRF4 YY1 E2F8 ZNF143 SP3 ZNF610 GLIS1 LOC728743 ZNF775 ENSG00000244151 NUB1 LRRC61 ZNF777 REPIN1 ZNF767P LOC105375564 ACTR3C
GH07I150303 Promoter/Enhancer 1.6 EPDnew ENCODE dbSUPER 11.5 +80.9 80859 0.2 HDGF PKNOX1 ATF1 ARNT E2F8 ATF7 NCOA1 TSHZ1 ZNF592 MEF2D ACTR3C RARRES2 ZNF775 LOC105375564 GC07P150294 LRRC61
GH07I150356 Enhancer 1.4 Ensembl ENCODE dbSUPER 12.8 +25.8 25793 3.6 HDGF ARNT YBX1 ZNF2 ZNF766 ZNF302 ZNF143 FOS ZNF263 MCM5 GC07P150358 NUB1 ENSG00000244151 ZNF767P REPIN1 ZNF777 ABCB8 ZNF775 LOC105375564 ZBED6CL
GH07I150354 Enhancer 1.3 Ensembl ENCODE dbSUPER 12.8 +28.6 28572 1.1 HDGF PKNOX1 ATF1 FOXA2 ARID4B YY1 ZNF766 ATF7 RXRA CAVIN1 GC07P150358 REPIN1 ZNF775 LOC105375564 ZBED6CL GC07P150352
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375564 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375564 Gene

Genomic Locations for LOC105375564 Gene
chr7:150,379,844-150,384,006
(GRCh38/hg38)
Size:
4,163 bases
Orientation:
Minus strand
chr7:150,076,943-150,080,973
(GRCh37/hg19)

Genomic View for LOC105375564 Gene

Genes around LOC105375564 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375564 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375564 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375564 Gene

Proteins for LOC105375564 Gene

Post-translational modifications for LOC105375564 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375564 Gene

Domains & Families for LOC105375564 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375564 Gene

Function for LOC105375564 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375564 Gene

Localization for LOC105375564 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375564 Gene

Pathways & Interactions for LOC105375564 Gene

SuperPathways for LOC105375564 Gene

No Data Available

Interacting Proteins for LOC105375564 Gene

Gene Ontology (GO) - Biological Process for LOC105375564 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375564 Gene

Drugs & Compounds for LOC105375564 Gene

No Compound Related Data Available

Transcripts for LOC105375564 Gene

mRNA/cDNA for LOC105375564 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375564 Gene

No ASD Table

Relevant External Links for LOC105375564 Gene

GeneLoc Exon Structure for
LOC105375564

Expression for LOC105375564 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375564 Gene

Orthologs for LOC105375564 Gene

Evolution for LOC105375564 Gene

ENSEMBL:
Gene Tree for LOC105375564 (if available)
TreeFam:
Gene Tree for LOC105375564 (if available)

No data available for Orthologs for LOC105375564 Gene

Paralogs for LOC105375564 Gene

No data available for Paralogs for LOC105375564 Gene

Variants for LOC105375564 Gene

Sequence variations from dbSNP and Humsavar for LOC105375564 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000375585 -- 150,382,803(-) C/T intron_variant
rs1000786037 -- 150,386,171(-) G/A upstream_transcript_variant
rs1000827637 -- 150,381,804(-) C/T intron_variant
rs1000930555 -- 150,380,249(-) G/C intron_variant
rs1001114317 -- 150,381,414(-) T/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375564 Gene

Disorders for LOC105375564 Gene

No disorders were found for LOC105375564 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375564 Gene

Publications for LOC105375564 Gene

No publications were found for LOC105375564 Gene.

Products for LOC105375564 Gene

Sources for LOC105375564 Gene

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