Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105375557 Gene

Subcategory (RNA class) for LOC105375557 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375557 Gene

  • Uncharacterized LOC105375557 3
  • AC006974.2 5

External Ids for LOC105375557 Gene

Previous GeneCards Identifiers for LOC105375557 Gene

  • GC07U904260

Summaries for LOC105375557 Gene

GeneCards Summary for LOC105375557 Gene

LOC105375557 (Uncharacterized LOC105375557) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375557 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375557 Gene

Genomics for LOC105375557 Gene

GeneHancer (GH) Regulatory Elements for LOC105375557 Gene

Promoters and enhancers for LOC105375557 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J148623 Enhancer 0.6 ENCODE 650.7 +1.6 1628 0.2 RNF2 ZNF189 ZFP37 FEZF1 ZNF843 OSR2 ZNF335 PRDM6 ZNF366 ZNF629 GC07P148623 LOC105375557 C7orf33
GH07J148625 Enhancer 0.6 ENCODE 650.7 +0.1 88 0.2 PKNOX1 ZBTB21 PRDM6 POLR2A GLIS1 ZNF24 WT1 SP7 LOC105375557 GC07P148623 C7orf33 CUL1 RPL32P17
GH07J148624 Enhancer 0.5 ENCODE 650.7 +0.7 687 0.4 RNF2 PRDM10 ZBTB17 TRIM28 LOC105375557 GC07P148623 C7orf33 CUL1
GH07J148620 Enhancer 1 FANTOM5 ENCODE 0.7 +4.6 4596 1 ELF3 FOXA2 THRB RAD21 RARA YY1 EGR1 RXRA REST PPARG CUL1 EZH2 GC07P148623 LOC105375557 GC07P148604
GH07J148628 Enhancer 0.5 ENCODE 0.7 -3.2 -3192 0.2 NR2F1 HMBOX1 ELF1 SPI1 C7orf33 LOC105375557 LOC643438
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375557 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375557 Gene

Genomic Locations for LOC105375557 Gene
chr7:148,543,561-148,625,612
(GRCh38/hg38)
Size:
82,052 bases
Orientation:
Minus strand

Genomic View for LOC105375557 Gene

Genes around LOC105375557 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375557 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375557 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375557 Gene

Proteins for LOC105375557 Gene

Post-translational modifications for LOC105375557 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375557 Gene

Domains & Families for LOC105375557 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375557 Gene

Function for LOC105375557 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375557 Gene

Localization for LOC105375557 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375557 Gene

Pathways & Interactions for LOC105375557 Gene

SuperPathways for LOC105375557 Gene

No Data Available

Interacting Proteins for LOC105375557 Gene

Gene Ontology (GO) - Biological Process for LOC105375557 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375557 Gene

Drugs & Compounds for LOC105375557 Gene

No Compound Related Data Available

Transcripts for LOC105375557 Gene

mRNA/cDNA for LOC105375557 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375557 Gene

No ASD Table

Relevant External Links for LOC105375557 Gene

GeneLoc Exon Structure for
LOC105375557

Expression for LOC105375557 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375557 Gene

Orthologs for LOC105375557 Gene

Evolution for LOC105375557 Gene

ENSEMBL:
Gene Tree for LOC105375557 (if available)
TreeFam:
Gene Tree for LOC105375557 (if available)

No data available for Orthologs for LOC105375557 Gene

Paralogs for LOC105375557 Gene

No data available for Paralogs for LOC105375557 Gene

Variants for LOC105375557 Gene

Sequence variations from dbSNP and Humsavar for LOC105375557 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000001952 -- 148,625,342(-) A/G intron_variant
rs1000354581 -- 148,624,997(-) G/A intron_variant
rs1001120206 -- 148,625,211(-) G/T intron_variant
rs1002306849 -- 148,623,841(-) T/C downstream_transcript_variant
rs1004354227 -- 148,626,326(-) T/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375557 Gene

Disorders for LOC105375557 Gene

No disorders were found for LOC105375557 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375557 Gene

Publications for LOC105375557 Gene

No publications were found for LOC105375557 Gene.

Products for LOC105375557 Gene

Sources for LOC105375557 Gene

Content
Loading form....