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Aliases for LOC105375554 Gene

Subcategory (RNA class) for LOC105375554 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375554 Gene

  • Uncharacterized LOC105375554 3

External Ids for LOC105375554 Gene

Previous GeneCards Identifiers for LOC105375554 Gene

  • GC07U904179

Summaries for LOC105375554 Gene

GeneCards Summary for LOC105375554 Gene

LOC105375554 (Uncharacterized LOC105375554) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375554 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375554 Gene

Genomics for LOC105375554 Gene

GeneHancer (GH) Regulatory Elements for LOC105375554 Gene

Promoters and enhancers for LOC105375554 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I148395 Enhancer 0.7 FANTOM5 ENCODE 0.3 +40.9 40879 0.7 MXI1 USF1 RFX1 POLR2A MAX GC07M148398 GC07M148399 GC07M148400 ENSG00000199370 LOC105375554
GH07I148434 Enhancer 0.2 ENCODE 0.8 +2.0 2048 0.3 LOC105375554 GC07M148398 GC07M148399 GC07M148400
GH07I148401 Enhancer 0.4 ENCODE 0.3 +34.8 34769 0.5 EMSY PRDM1 GC07M148398 GC07M148399 GC07M148400 LOC105375554
GH07I148396 Enhancer 0.4 ENCODE 0.3 +40.4 40365 0.2 MXI1 MAX REST GC07M148398 GC07M148399 GC07M148400 ENSG00000199370 LOC105375554
GH07I148385 Enhancer 0.4 ENCODE 0.2 +51.6 51606 0.6 GATA3 POLR2A GC07P148390 GC07P148333 LOC105375554
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375554 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375554 Gene

Genomic Locations for LOC105375554 Gene
chr7:148,381,638-148,436,899
(GRCh38/hg38)
Size:
55,262 bases
Orientation:
Minus strand

Genomic View for LOC105375554 Gene

Genes around LOC105375554 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375554 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375554 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375554 Gene

Proteins for LOC105375554 Gene

Post-translational modifications for LOC105375554 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375554 Gene

Domains & Families for LOC105375554 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375554 Gene

Function for LOC105375554 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375554 Gene

Localization for LOC105375554 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375554 Gene

Pathways & Interactions for LOC105375554 Gene

SuperPathways for LOC105375554 Gene

No Data Available

Interacting Proteins for LOC105375554 Gene

Gene Ontology (GO) - Biological Process for LOC105375554 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375554 Gene

Drugs & Compounds for LOC105375554 Gene

No Compound Related Data Available

Transcripts for LOC105375554 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375554 Gene

No ASD Table

Relevant External Links for LOC105375554 Gene

GeneLoc Exon Structure for
LOC105375554

No data available for mRNA/cDNA for LOC105375554 Gene

Expression for LOC105375554 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375554 Gene

Orthologs for LOC105375554 Gene

No data available for Orthologs and Evolution for LOC105375554 Gene

Paralogs for LOC105375554 Gene

No data available for Paralogs for LOC105375554 Gene

Variants for LOC105375554 Gene

Sequence variations from dbSNP and Humsavar for LOC105375554 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1022464988 uncertain-significance, Cortical dysplasia-focal epilepsy syndrome, Pitt-Hopkins-like syndrome 148,416,056(-) C/T genic_upstream_transcript_variant, intron_variant
rs10243309 benign, Cortical dysplasia-focal epilepsy syndrome, Pitt-Hopkins-like syndrome 148,418,537(-) C/T genic_upstream_transcript_variant, intron_variant
rs10251347 benign, Pitt-Hopkins-like syndrome, Cortical dysplasia-focal epilepsy syndrome 148,420,354(-) C/G genic_upstream_transcript_variant, intron_variant
rs10280038 benign, Cortical dysplasia-focal epilepsy syndrome, Pitt-Hopkins-like syndrome 148,420,455(-) G/A genic_upstream_transcript_variant, intron_variant
rs1057522590 likely-benign, Cortical dysplasia-focal epilepsy syndrome, not specified 148,415,610(-) C/G/T genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375554 Gene

Disorders for LOC105375554 Gene

No disorders were found for LOC105375554 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375554 Gene

Publications for LOC105375554 Gene

No publications were found for LOC105375554 Gene.

Products for LOC105375554 Gene

Sources for LOC105375554 Gene

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