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Aliases for LOC105375546 Gene

Subcategory (RNA class) for LOC105375546 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375546 Gene

  • Uncharacterized LOC105375546 3

External Ids for LOC105375546 Gene

Previous GeneCards Identifiers for LOC105375546 Gene

  • GC07U903978

Summaries for LOC105375546 Gene

GeneCards Summary for LOC105375546 Gene

LOC105375546 (Uncharacterized LOC105375546) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375546 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375546 Gene

Genomics for LOC105375546 Gene

GeneHancer (GH) Regulatory Elements for LOC105375546 Gene

Promoters and enhancers for LOC105375546 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J143239 Enhancer 0.4 Ensembl 650.7 +0.9 926 0.2 NFIC NFIB LOC105375546 HINT1P1 CLCN1 FAM131B GSTK1
GH07J143237 Enhancer 0.2 Ensembl 650.7 +0.2 226 0.4 LOC105375546 CLCN1 HINT1P1 FAM131B GSTK1
GH07J143238 Enhancer 1 Ensembl ENCODE 0.7 +2.4 2447 2.4 RB1 RAD21 ETS1 YY1 E2F8 ARID2 ZNF143 ATF7 SMARCA5 ZNF654 HINT1P1 CLCN1 FAM131B LOC105375546 GSTK1
GH07J143262 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.3 +26.5 26538 2.8 HDGF SMAD1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 POLR2B GSTK1 LOC154761 TCAF2 CASP2 TMEM139 LOC105375545 LOC105375546
GH07J143248 Enhancer 1.1 Ensembl ENCODE 0.4 +12.4 12428 2.6 ELF3 MLX ARID4B RAD21 RARA ETS1 YY1 ZNF280A ZNF614 EGR1 TMEM139 CASP2 LOC105375545 RN7SL535P FAM131B EPHB6 GSTK1 LOC105375546
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375546 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375546 Gene

Genomic Locations for LOC105375546 Gene
chr7:143,237,575-143,263,243
(GRCh38/hg38)
Size:
25,669 bases
Orientation:
Plus strand

Genomic View for LOC105375546 Gene

Genes around LOC105375546 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375546 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375546 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375546 Gene

Proteins for LOC105375546 Gene

Post-translational modifications for LOC105375546 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375546 Gene

Domains & Families for LOC105375546 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375546 Gene

Function for LOC105375546 Gene

Phenotypes From GWAS Catalog for LOC105375546 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375546 Gene

Localization for LOC105375546 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375546 Gene

Pathways & Interactions for LOC105375546 Gene

SuperPathways for LOC105375546 Gene

No Data Available

Interacting Proteins for LOC105375546 Gene

Gene Ontology (GO) - Biological Process for LOC105375546 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375546 Gene

Drugs & Compounds for LOC105375546 Gene

No Compound Related Data Available

Transcripts for LOC105375546 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375546 Gene

No ASD Table

Relevant External Links for LOC105375546 Gene

GeneLoc Exon Structure for
LOC105375546

No data available for mRNA/cDNA for LOC105375546 Gene

Expression for LOC105375546 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375546 Gene

Orthologs for LOC105375546 Gene

No data available for Orthologs and Evolution for LOC105375546 Gene

Paralogs for LOC105375546 Gene

No data available for Paralogs for LOC105375546 Gene

Variants for LOC105375546 Gene

Sequence variations from dbSNP and Humsavar for LOC105375546 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000013254 -- 143,244,114(+) C/G non_coding_transcript_variant
rs1000056724 -- 143,248,738(+) T/G intron_variant
rs1000528142 -- 143,255,960(+) T/C intron_variant
rs1000967128 -- 143,248,965(+) G/A intron_variant
rs1001190470 -- 143,244,387(+) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375546 Gene

Disorders for LOC105375546 Gene

No disorders were found for LOC105375546 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375546 Gene

Publications for LOC105375546 Gene

No publications were found for LOC105375546 Gene.

Products for LOC105375546 Gene

Sources for LOC105375546 Gene

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