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Aliases for LOC105375535 Gene

Subcategory (RNA class) for LOC105375535 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375535 Gene

  • Uncharacterized LOC105375535 3

External Ids for LOC105375535 Gene

Previous GeneCards Identifiers for LOC105375535 Gene

  • GC07U904063

Summaries for LOC105375535 Gene

GeneCards Summary for LOC105375535 Gene

LOC105375535 (Uncharacterized LOC105375535) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375535 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375535 Gene

Genomics for LOC105375535 Gene

GeneHancer (GH) Regulatory Elements for LOC105375535 Gene

Promoters and enhancers for LOC105375535 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I140637 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 550.8 -1.1 -1128 5.6 HDGF SIN3A GLI4 ZNF2 GLIS2 ZNF416 KLF7 ATF7 KLF13 YY2 LOC105375535 SLC37A3 NDUFB2 NDUFB2-AS1 BRAF PARP12 ADCK2 TMEM178B GC07P140619 DENND2A
GH07I140621 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -15.6 -15568 8.2 PKNOX1 FOXA2 SIN3A FEZF1 ZNF2 ZNF121 GLIS2 FOS RXRA YY2 DENND2A ADCK2 NDUFB2 TMEM178B GC07P140619 LOC105375535
GH07I140645 Enhancer 0.5 ENCODE 0.8 +4.3 4339 0.1 CTCF ZNF143 ZMYM3 REST ZBTB12 RN7SL771P LOC105375535 DENND2A
GH07I140647 Enhancer 0.7 ENCODE 0.4 +6.3 6269 0.2 HDGF CTCF RAD21 ZFHX2 GATA3 CTBP1 FOXK2 POLR2A ZNF143 NR2F6 RN7SL771P LOC105375535 DENND2A ADCK2
GH07I140630 Enhancer 0.6 ENCODE dbSUPER 0.4 -9.2 -9238 1.5 POLR2A CREB1 ADCK2 DENND2A NDUFB2 LOC105375535 GC07P140619
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375535 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375535 Gene

Genomic Locations for LOC105375535 Gene
chr7:140,640,967-140,652,431
(GRCh38/hg38)
Size:
11,465 bases
Orientation:
Plus strand

Genomic View for LOC105375535 Gene

Genes around LOC105375535 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375535 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375535 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375535 Gene

Proteins for LOC105375535 Gene

Post-translational modifications for LOC105375535 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375535 Gene

Domains & Families for LOC105375535 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375535 Gene

Function for LOC105375535 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375535 Gene

Localization for LOC105375535 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375535 Gene

Pathways & Interactions for LOC105375535 Gene

SuperPathways for LOC105375535 Gene

No Data Available

Interacting Proteins for LOC105375535 Gene

Gene Ontology (GO) - Biological Process for LOC105375535 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375535 Gene

Drugs & Compounds for LOC105375535 Gene

No Compound Related Data Available

Transcripts for LOC105375535 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375535 Gene

No ASD Table

Relevant External Links for LOC105375535 Gene

GeneLoc Exon Structure for
LOC105375535

No data available for mRNA/cDNA for LOC105375535 Gene

Expression for LOC105375535 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375535 Gene

Orthologs for LOC105375535 Gene

No data available for Orthologs and Evolution for LOC105375535 Gene

Paralogs for LOC105375535 Gene

No data available for Paralogs for LOC105375535 Gene

Variants for LOC105375535 Gene

Sequence variations from dbSNP and Humsavar for LOC105375535 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000133761 -- 140,641,245(+) G/A/C genic_upstream_transcript_variant, non_coding_transcript_variant
rs1000234266 -- 140,642,461(+) G/A genic_upstream_transcript_variant, intron_variant
rs1000441224 -- 140,649,045(+) C/T intron_variant
rs1000749964 -- 140,648,760(+) A/G intron_variant
rs1000888990 -- 140,649,385(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375535 Gene

Disorders for LOC105375535 Gene

No disorders were found for LOC105375535 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375535 Gene

Publications for LOC105375535 Gene

No publications were found for LOC105375535 Gene.

Products for LOC105375535 Gene

Sources for LOC105375535 Gene

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