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Aliases for LOC105375530 Gene

Subcategory (RNA class) for LOC105375530 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375530 Gene

  • Uncharacterized LOC105375530 3

External Ids for LOC105375530 Gene

Previous GeneCards Identifiers for LOC105375530 Gene

  • GC07U904034

Summaries for LOC105375530 Gene

GeneCards Summary for LOC105375530 Gene

LOC105375530 (Uncharacterized LOC105375530) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375530 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375530 Gene

Genomics for LOC105375530 Gene

GeneHancer (GH) Regulatory Elements for LOC105375530 Gene

Promoters and enhancers for LOC105375530 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I139588 Enhancer 0.8 ENCODE dbSUPER 0.8 +4.7 4717 1.3 SOX6 CEBPB CEBPG ZEB2 ZFHX2 RUNX1 ZNF766 FOXK2 POLR2A KLF16 ERHP1 CLEC2L KDM7A LOC105375530 PIR36040 HIPK2
GH07I139679 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +97.9 97940 5.8 ATF1 MLX ZFP64 SIN3A YY1 ATF7 FOS RUNX3 RXRA SP5 TBXAS1 HIPK2 ERHP1 CLEC2L KDM7A PIR36040 LOC105375530
GH07I139647 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +64.3 64329 3.6 PKNOX1 FOXA2 BMI1 BATF IRF4 RARA YY1 ATF7 ETV6 IKZF2 TBXAS1 HIPK2 KDM7A LOC105375530 PIR36040
GH07I139598 Enhancer 0.7 dbSUPER 0.4 +15.4 15449 2.9 MEIS2 ESRRA PKNOX1 USF1 NFIB BACH1 SIN3A ZNF644 RFX5 FOSL1 HIPK2 TBXAS1 LOC105375530 PIR36040
GH07I139602 Enhancer 0.7 dbSUPER 0.4 +19.0 19038 1.8 HDAC1 HDGF MEIS2 CTCF ARNT RAD21 ZFHX2 ARID2 ZNF143 SMC3 HIPK2 TBXAS1 LOC105375530 PIR36040
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375530 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375530 Gene

Genomic Locations for LOC105375530 Gene
chr7:139,584,072-139,615,848
(GRCh38/hg38)
Size:
31,777 bases
Orientation:
Plus strand

Genomic View for LOC105375530 Gene

Genes around LOC105375530 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375530 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375530 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375530 Gene

Proteins for LOC105375530 Gene

Post-translational modifications for LOC105375530 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375530 Gene

Domains & Families for LOC105375530 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375530 Gene

Function for LOC105375530 Gene

Phenotypes From GWAS Catalog for LOC105375530 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375530 Gene

Localization for LOC105375530 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375530 Gene

Pathways & Interactions for LOC105375530 Gene

SuperPathways for LOC105375530 Gene

No Data Available

Interacting Proteins for LOC105375530 Gene

Gene Ontology (GO) - Biological Process for LOC105375530 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375530 Gene

Drugs & Compounds for LOC105375530 Gene

No Compound Related Data Available

Transcripts for LOC105375530 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375530 Gene

No ASD Table

Relevant External Links for LOC105375530 Gene

GeneLoc Exon Structure for
LOC105375530

No data available for mRNA/cDNA for LOC105375530 Gene

Expression for LOC105375530 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375530 Gene

Orthologs for LOC105375530 Gene

No data available for Orthologs and Evolution for LOC105375530 Gene

Paralogs for LOC105375530 Gene

No data available for Paralogs for LOC105375530 Gene

Variants for LOC105375530 Gene

Sequence variations from dbSNP and Humsavar for LOC105375530 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000203999 -- 139,594,147(+) C/G intron_variant
rs1000274994 -- 139,599,998(+) T/A intron_variant
rs1000302282 -- 139,612,563(+) A/G intron_variant
rs1000583520 -- 139,607,827(+) C/G intron_variant
rs1000726396 -- 139,594,885(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375530 Gene

Disorders for LOC105375530 Gene

No disorders were found for LOC105375530 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375530 Gene

Publications for LOC105375530 Gene

No publications were found for LOC105375530 Gene.

Products for LOC105375530 Gene

Sources for LOC105375530 Gene

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