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Aliases for LOC105375522 Gene

Subcategory (RNA class) for LOC105375522 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375522 Gene

  • Uncharacterized LOC105375522 3

External Ids for LOC105375522 Gene

Previous GeneCards Identifiers for LOC105375522 Gene

  • GC07U904183

Summaries for LOC105375522 Gene

GeneCards Summary for LOC105375522 Gene

LOC105375522 (Uncharacterized LOC105375522) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375522 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375522 Gene

Genomics for LOC105375522 Gene

GeneHancer (GH) Regulatory Elements for LOC105375522 Gene

Promoters and enhancers for LOC105375522 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I135757 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +0.6 555 2.7 RBAK TRIM24 LOC105375522 NUP205 ENSG00000273219 FAM180A ENSG00000224746 GC07M135854
GH07I135761 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.8 +4.1 4096 2.7 PKNOX1 RXRA ETV1 NR4A1 ZBTB11 MAX REST RAD21 NR2F2 GABPA RPL15P11 STMP1 ENSG00000224746 FAM180A LOC105375522 GC07M135854
GH07I135771 Enhancer 1.6 VISTA FANTOM5 Ensembl ENCODE dbSUPER 0.4 +14.8 14780 3.2 CTCF FOXA2 CEBPG ZIC2 ZNF2 RAD21 FOSL1 ZNF335 CTBP1 GATA3 FAM180A STMP1 SLC13A4 LOC105375522 GC07M135854
GH07I135753 Enhancer 0.7 ENCODE dbSUPER 0.8 -4.5 -4476 1.5 USF1 MAX POU5F1 ZNF24 FOXA1 STMP1 ENSG00000224746 RPL15P11 LOC105375522 FAM180A
GH07I135801 Enhancer 1 Ensembl ENCODE 0.3 +42.7 42747 0.4 HDGF FOXA2 RB1 ARNT ZNF2 RAD21 RFX5 YY1 ARID2 SCRT2 LOC105375522 GC07M135854
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375522 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375522 Gene

Genomic Locations for LOC105375522 Gene
chr7:135,758,457-135,771,179
(GRCh38/hg38)
Size:
12,723 bases
Orientation:
Plus strand

Genomic View for LOC105375522 Gene

Genes around LOC105375522 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375522 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375522 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375522 Gene

Proteins for LOC105375522 Gene

Post-translational modifications for LOC105375522 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375522 Gene

Domains & Families for LOC105375522 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375522 Gene

Function for LOC105375522 Gene

Phenotypes From GWAS Catalog for LOC105375522 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375522 Gene

Localization for LOC105375522 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375522 Gene

Pathways & Interactions for LOC105375522 Gene

SuperPathways for LOC105375522 Gene

No Data Available

Interacting Proteins for LOC105375522 Gene

Gene Ontology (GO) - Biological Process for LOC105375522 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375522 Gene

Drugs & Compounds for LOC105375522 Gene

No Compound Related Data Available

Transcripts for LOC105375522 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375522 Gene

No ASD Table

Relevant External Links for LOC105375522 Gene

GeneLoc Exon Structure for
LOC105375522

No data available for mRNA/cDNA for LOC105375522 Gene

Expression for LOC105375522 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375522 Gene

Orthologs for LOC105375522 Gene

No data available for Orthologs and Evolution for LOC105375522 Gene

Paralogs for LOC105375522 Gene

No data available for Paralogs for LOC105375522 Gene

Variants for LOC105375522 Gene

Sequence variations from dbSNP and Humsavar for LOC105375522 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000425842 -- 135,758,642(+) A/G genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000457115 -- 135,759,009(+) G/A intron_variant
rs1000793548 -- 135,757,683(+) T/C upstream_transcript_variant
rs1000860300 -- 135,763,306(+) T/C intron_variant
rs1000904541 -- 135,766,841(+) C/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375522 Gene

Disorders for LOC105375522 Gene

No disorders were found for LOC105375522 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375522 Gene

Publications for LOC105375522 Gene

No publications were found for LOC105375522 Gene.

Products for LOC105375522 Gene

Sources for LOC105375522 Gene

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