Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105375521 Gene

Subcategory (RNA class) for LOC105375521 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375521 Gene

  • Uncharacterized LOC105375521 3

External Ids for LOC105375521 Gene

Previous GeneCards Identifiers for LOC105375521 Gene

  • GC07U904378

Summaries for LOC105375521 Gene

GeneCards Summary for LOC105375521 Gene

LOC105375521 (Uncharacterized LOC105375521) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375521 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375521 Gene

Genomics for LOC105375521 Gene

GeneHancer (GH) Regulatory Elements for LOC105375521 Gene

Promoters and enhancers for LOC105375521 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I135683 Enhancer 0.8 ENCODE dbSUPER 0.8 -2.2 -2150 2.4 RXRA CEBPB CEBPG REST NR2F2 JUND POLR2A SPI1 GC07M135545 RPL15P11 STMP1 FAM180A LOC105375521 SLC13A4
GH07I135689 Enhancer 0.7 ENCODE dbSUPER 0.8 +4.3 4293 3 ZFP69B KLF1 JUND FOS STMP1 RPL15P11 RNU6-1154P FAM180A ENSG00000224746 LOC105375521 ENSG00000273219 SLC13A4
GH07I135706 Enhancer 0.8 ENCODE 0.3 +20.3 20289 2.4 PKNOX1 FEZF1 ZNF2 ZBTB40 ELK1 ZNF366 ZSCAN5C KLF7 FOS RCOR1 RPL15P11 SLC13A4 ENSG00000273219 STMP1 LOC105375521
GH07I135704 Enhancer 0.5 ENCODE 0.4 +17.2 17224 0.2 CTCF ZNF143 HDAC8 TRIM28 ENSG00000273219 LOC105375521 SLC13A4
GH07I135703 Enhancer 0.4 ENCODE 0.4 +16.7 16666 0.6 IKZF1 HDAC8 ENSG00000273219 STMP1 RPL15P11 LOC105375521 SLC13A4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375521 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375521 Gene

Genomic Locations for LOC105375521 Gene
chr7:135,687,024-135,708,104
(GRCh38/hg38)
Size:
21,081 bases
Orientation:
Plus strand

Genomic View for LOC105375521 Gene

Genes around LOC105375521 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375521 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375521 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375521 Gene

Proteins for LOC105375521 Gene

Post-translational modifications for LOC105375521 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375521 Gene

Domains & Families for LOC105375521 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375521 Gene

Function for LOC105375521 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375521 Gene

Localization for LOC105375521 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375521 Gene

Pathways & Interactions for LOC105375521 Gene

SuperPathways for LOC105375521 Gene

No Data Available

Interacting Proteins for LOC105375521 Gene

Gene Ontology (GO) - Biological Process for LOC105375521 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375521 Gene

Drugs & Compounds for LOC105375521 Gene

No Compound Related Data Available

Transcripts for LOC105375521 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375521 Gene

No ASD Table

Relevant External Links for LOC105375521 Gene

GeneLoc Exon Structure for
LOC105375521

No data available for mRNA/cDNA for LOC105375521 Gene

Expression for LOC105375521 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375521 Gene

Orthologs for LOC105375521 Gene

No data available for Orthologs and Evolution for LOC105375521 Gene

Paralogs for LOC105375521 Gene

No data available for Paralogs for LOC105375521 Gene

Variants for LOC105375521 Gene

Sequence variations from dbSNP and Humsavar for LOC105375521 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000887613 -- 135,692,688(+) A/T non_coding_transcript_variant
rs1001113754 -- 135,687,747(+) A/G intron_variant
rs1001312049 -- 135,685,923(+) G/A upstream_transcript_variant
rs1001442103 -- 135,685,112(+) C/T upstream_transcript_variant
rs1002245377 -- 135,691,794(+) C/T non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375521 Gene

Disorders for LOC105375521 Gene

No disorders were found for LOC105375521 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375521 Gene

Publications for LOC105375521 Gene

No publications were found for LOC105375521 Gene.

Products for LOC105375521 Gene

Sources for LOC105375521 Gene

Content
Loading form....