Aliases for LOC105375520 Gene

Subcategory (RNA class) for LOC105375520 Gene

ncRNA

Aliases for LOC105375520 Gene

  • Uncharacterized LOC105375520 3

External Ids for LOC105375520 Gene

Previous GeneCards Identifiers for LOC105375520 Gene

  • GC07U904380

Summaries for LOC105375520 Gene

GeneCards Summary for LOC105375520 Gene

LOC105375520 (Uncharacterized LOC105375520) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375520 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105375520 Gene

Genomics for LOC105375520 Gene

GeneHancer (GH) Regulatory Elements for LOC105375520 Gene

Promoters and enhancers for LOC105375520 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J134546 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +10.3 10310 2.7 CTCF ZSCAN5C TCF12 SIX5 TRIM28 REST KLF4 HES1 CUX1 RELA AKR1B15 RF02002-042 LOC105375520 RF00017-6652
GH07J134561 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.4 -5436 5.1 ZNF217 TCF12 FOXA1 TSC22D4 GATAD2B NFYB CTBP1 TRIM25 CREB1 ZNF316 piR-38599-030 NUP205 AKR1B15 AGBL3 AKR1B1 ENSG00000272941 LRGUK LOC105375520 RF00017-6652
GH07J134554 Enhancer 0.7 ENCODE dbSUPER 0.7 +4.2 4150 0.2 CTCF TCF7 RFX1 LEF1 FOXA2 TCF7L2 FOXA1 RAD21 SCRT1 ZNF644 LOC105375520 piR-30594-006 AKR1B15 RF00017-6652
GH07J134555 Enhancer 0.6 Ensembl dbSUPER 0.7 +3.8 3833 0.2 RFX1 TCF7L2 CTCF LEF1 LOC105375520 piR-30594-006 AKR1B15 RF00017-6652
GH07J134551 Enhancer 0.7 Ensembl dbSUPER 0.4 +6.4 6433 0.6 CTCF SIX5 RAD21 ZNF654 NR3C1 CTCFL PKNOX1 piR-40166 piR-30594-006 AKR1B15 LOC105375520 RF00017-6652
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105375520 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375520 Gene

Genomic Locations for LOC105375520 Gene
chr7:134,549,248-134,558,334
(GRCh38/hg38)
Size:
9,087 bases
Orientation:
Minus strand

Genomic View for LOC105375520 Gene

Genes around LOC105375520 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375520 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375520 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375520 Gene

Proteins for LOC105375520 Gene

Post-translational modifications for LOC105375520 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375520 Gene

Domains & Families for LOC105375520 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105375520 Gene

Function for LOC105375520 Gene

Phenotypes From GWAS Catalog for LOC105375520 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375520 Gene

Localization for LOC105375520 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375520 Gene

Pathways & Interactions for LOC105375520 Gene

PathCards logo

SuperPathways for LOC105375520 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105375520 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105375520 Gene

Drugs & Compounds for LOC105375520 Gene

No Compound Related Data Available

Transcripts for LOC105375520 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375520 Gene

No ASD Table

Relevant External Links for LOC105375520 Gene

GeneLoc Exon Structure for
LOC105375520

No data available for mRNA/cDNA for LOC105375520 Gene

Expression for LOC105375520 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375520 Gene

Orthologs for LOC105375520 Gene

No data available for Orthologs and Evolution for LOC105375520 Gene

Paralogs for LOC105375520 Gene

No data available for Paralogs for LOC105375520 Gene

Variants for LOC105375520 Gene

Additional dbSNP identifiers (rs#s) for LOC105375520 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375520 Gene

Disorders for LOC105375520 Gene

No disorders were found for LOC105375520 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375520 Gene

Publications for LOC105375520 Gene

No publications were found for LOC105375520 Gene.

No data available for Mastermind for LOC105375520 Gene

Products for LOC105375520 Gene

Sources for LOC105375520 Gene