Aliases for LOC105375519 Gene

Subcategory (RNA class) for LOC105375519 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC105375519 Gene

  • Uncharacterized LOC105375519 3
  • Novel Transcript 5
  • NONHSAG048857 92
  • HSALNG0061506 167
  • Lnc-AKR1B1-1 168
  • AC009275.1 5

External Ids for LOC105375519 Gene

Previous GeneCards Identifiers for LOC105375519 Gene

  • GC07U904085
  • GC07M134415

Summaries for LOC105375519 Gene

GeneCards Summary for LOC105375519 Gene

LOC105375519 (Uncharacterized LOC105375519) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105375519 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105375519 Gene

Genomics for LOC105375519 Gene

GeneHancer (GH) Regulatory Elements for LOC105375519 Gene

Promoters and enhancers for LOC105375519 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J134431 Promoter/Enhancer 2 Ensembl ENCODE CraniofacialAtlas dbSUPER 506.2 +0.0 37 1.9 ZNF217 CTCF TCF12 NRF1 POLR2G PHF8 ZIC2 AFF1 ZBTB26 TRIM28 LOC105375519 SLC35B4 AKR1B1 piR-31926-033
GH07J134363 Enhancer 1.1 Ensembl ENCODE 6.8 +65.9 65865 7.7 EP300 ZNF217 TCF12 NCOR1 JUND KDM6A CLOCK TCF7 FOXA1 KLF4 LOC105375518 lnc-SLC35B4-2 CALD1 LOC105375519 AKR1B1 SLC35B4 LOC105375517
GH07J134373 Enhancer 0.9 Ensembl ENCODE 6.3 +57.8 57833 1.8 FOXA2 RAD51 USF1 ZBTB33 JUND ZFHX2 HOMEZ EHMT2 RAD21 RXRA LOC105375517 SLC35B4 ENSG00000231098 LOC105375519 piR-52079-192 LOC105375518
GH07J134394 Enhancer 0.3 Ensembl 6.1 +38.3 38333 0.4 KDM5B LOC105375519 piR-31926-033
GH07J134434 Enhancer 1 Ensembl ENCODE dbSUPER 0.7 -2.8 -2806 2.2 TCF12 FOS EP300 DEK CEBPG FOSL2 CEBPB PBX2 JUN RCOR1 SLC35B4 AKR1B15 AKR1B1 LOC105375519 lnc-SLC35B4-4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105375519 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375519 Gene

Genomic Locations for LOC105375519 Gene
chr7:134,368,636-134,432,534
(GRCh38/hg38)
Size:
63,899 bases
Orientation:
Minus strand
chr7:134,101,042-134,117,205
(GRCh37/hg19)
Size:
16,164 bases
Orientation:
Minus strand

Genomic View for LOC105375519 Gene

Genes around LOC105375519 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375519 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375519 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375519 Gene

Proteins for LOC105375519 Gene

Post-translational modifications for LOC105375519 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375519 Gene

Domains & Families for LOC105375519 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105375519 Gene

Function for LOC105375519 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375519 Gene

Localization for LOC105375519 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375519 Gene

Pathways & Interactions for LOC105375519 Gene

PathCards logo

SuperPathways for LOC105375519 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105375519 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105375519 Gene

Drugs & Compounds for LOC105375519 Gene

No Compound Related Data Available

Transcripts for LOC105375519 Gene

mRNA/cDNA for LOC105375519 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375519 Gene

No ASD Table

Relevant External Links for LOC105375519 Gene

GeneLoc Exon Structure for
LOC105375519

Expression for LOC105375519 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375519 Gene

Orthologs for LOC105375519 Gene

Evolution for LOC105375519 Gene

ENSEMBL:
Gene Tree for LOC105375519 (if available)
TreeFam:
Gene Tree for LOC105375519 (if available)

No data available for Orthologs for LOC105375519 Gene

Paralogs for LOC105375519 Gene

No data available for Paralogs for LOC105375519 Gene

Variants for LOC105375519 Gene

Additional dbSNP identifiers (rs#s) for LOC105375519 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375519 Gene

Disorders for LOC105375519 Gene

No disorders were found for LOC105375519 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375519 Gene

Publications for LOC105375519 Gene

No publications were found for LOC105375519 Gene.

No data available for Mastermind for LOC105375519 Gene

Products for LOC105375519 Gene

Sources for LOC105375519 Gene