Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105375518 Gene

Subcategory (RNA class) for LOC105375518 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375518 Gene

  • Uncharacterized LOC105375518 3

External Ids for LOC105375518 Gene

Previous GeneCards Identifiers for LOC105375518 Gene

  • GC07U903935

Summaries for LOC105375518 Gene

GeneCards Summary for LOC105375518 Gene

LOC105375518 (Uncharacterized LOC105375518) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375518 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375518 Gene

Genomics for LOC105375518 Gene

GeneHancer (GH) Regulatory Elements for LOC105375518 Gene

Promoters and enhancers for LOC105375518 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J134363 Enhancer 1.2 Ensembl ENCODE 650.7 -1.6 -1602 3.6 ATF1 FOXA2 MLX SIN3A YY1 TCF12 ZNF766 FOS ATF7 NFKBIZ LOC105375518 LOC105375519 AKR1B1 SLC35B4 ENSG00000229177
GH07J134367 Enhancer 1.1 Ensembl ENCODE 0.7 +2.4 2424 2.7 FOXA2 MLX SIN3A ZNF48 YY1 ATF7 FOS MCM3 RXRA REST CALD1 LOC105375519 AKR1B1 SLC35B4 LOC105375518 LOC105375517
GH07J134358 Enhancer 0.8 ENCODE 0.4 -8.3 -8347 0.2 BCOR CTCF USF1 ARNT ARID4B MAX MZF1 E4F1 RAD21 CC2D1A SLC35B4 ENSG00000229177 LOC105375518
GH07J134355 Enhancer 0.8 ENCODE 0.4 -10.6 -10591 1.2 ELF3 FOXA2 RAD21 YY1 EGR1 FOS CREM RXRA CEBPB REST SLC35B4 ENSG00000231098 AKR1B15 ENSG00000229177 LOC105375518
GH07J134359 Enhancer 0.8 ENCODE 0.4 -6.9 -6867 0 HDAC1 TCF12 GATA2 ZBTB11 ZEB2 MBD2 NFIC KLF16 ZNF184 SMARCA4 LOC105375518 ENSG00000229177
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375518 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375518 Gene

Genomic Locations for LOC105375518 Gene
chr7:134,366,771-134,384,225
(GRCh38/hg38)
Size:
17,455 bases
Orientation:
Plus strand

Genomic View for LOC105375518 Gene

Genes around LOC105375518 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375518 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375518 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375518 Gene

Proteins for LOC105375518 Gene

Post-translational modifications for LOC105375518 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375518 Gene

Domains & Families for LOC105375518 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375518 Gene

Function for LOC105375518 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375518 Gene

Localization for LOC105375518 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375518 Gene

Pathways & Interactions for LOC105375518 Gene

SuperPathways for LOC105375518 Gene

No Data Available

Interacting Proteins for LOC105375518 Gene

Gene Ontology (GO) - Biological Process for LOC105375518 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375518 Gene

Drugs & Compounds for LOC105375518 Gene

No Compound Related Data Available

Transcripts for LOC105375518 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375518 Gene

No ASD Table

Relevant External Links for LOC105375518 Gene

GeneLoc Exon Structure for
LOC105375518

No data available for mRNA/cDNA for LOC105375518 Gene

Expression for LOC105375518 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375518 Gene

Orthologs for LOC105375518 Gene

No data available for Orthologs and Evolution for LOC105375518 Gene

Paralogs for LOC105375518 Gene

No data available for Paralogs for LOC105375518 Gene

Variants for LOC105375518 Gene

Sequence variations from dbSNP and Humsavar for LOC105375518 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000256574 -- 134,379,884(+) G/T intron_variant
rs1000269186 -- 134,380,201(+) A/T intron_variant
rs1000522681 -- 134,381,481(+) T/G intron_variant
rs1000544894 -- 134,368,786(+) C/T intron_variant
rs1000641160 -- 134,380,044(+) C/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375518 Gene

Disorders for LOC105375518 Gene

No disorders were found for LOC105375518 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375518 Gene

Publications for LOC105375518 Gene

No publications were found for LOC105375518 Gene.

Products for LOC105375518 Gene

Sources for LOC105375518 Gene

Content
Loading form....