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Aliases for LOC105375517 Gene

Subcategory (RNA class) for LOC105375517 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375517 Gene

  • Uncharacterized LOC105375517 3

External Ids for LOC105375517 Gene

Previous GeneCards Identifiers for LOC105375517 Gene

  • GC07U903957

Summaries for LOC105375517 Gene

GeneCards Summary for LOC105375517 Gene

LOC105375517 (Uncharacterized LOC105375517) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375517 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375517 Gene

Genomics for LOC105375517 Gene

GeneHancer (GH) Regulatory Elements for LOC105375517 Gene

Promoters and enhancers for LOC105375517 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I134373 Enhancer 0.7 ENCODE 550.8 -0.2 -234 1.1 SOX13 FOXA2 TAF1 ZNF792 ZNF644 RAD21 YY1 ZFHX2 HNF4G HOMEZ LOC105375517 SLC35B4 ENSG00000231098 LOC105375518 LOC105375519
GH07I134367 Enhancer 1.1 Ensembl ENCODE 0.4 +5.1 5075 2.7 ELF3 FOXA2 NFIB MLX SIN3A ZNF48 RAD21 RARA YY1 ZNF335 CALD1 LOC105375519 AKR1B1 SLC35B4 LOC105375518 LOC105375517
GH07I134420 Enhancer 0.8 Ensembl ENCODE 0.2 -46.4 -46435 0.6 CTCF ZNF654 RB1 REST KDM5A RAD21 RFX5 SP1 CC2D1A ATF3 LOC105375519 LOC105375517
GH07I134419 Enhancer 0.8 ENCODE 0.2 -45.0 -45004 0.1 FOXA2 MLX DNMT3B RAD21 RARA THAP11 EGR2 RXRA SP5 PPARG LOC105375519 LOC105375517
GH07I134421 Enhancer 0.6 ENCODE 0.2 -48.0 -47996 1.5 GATAD2A STAT1 RXRA MAX USF2 SIN3A ZNF384 REST KLF4 RARA LOC105375519 LOC105375517
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375517 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375517 Gene

Genomic Locations for LOC105375517 Gene
chr7:134,368,823-134,374,270
(GRCh38/hg38)
Size:
5,448 bases
Orientation:
Minus strand

Genomic View for LOC105375517 Gene

Genes around LOC105375517 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375517 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375517 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375517 Gene

Proteins for LOC105375517 Gene

Post-translational modifications for LOC105375517 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375517 Gene

Domains & Families for LOC105375517 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375517 Gene

Function for LOC105375517 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375517 Gene

Localization for LOC105375517 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375517 Gene

Pathways & Interactions for LOC105375517 Gene

SuperPathways for LOC105375517 Gene

No Data Available

Interacting Proteins for LOC105375517 Gene

Gene Ontology (GO) - Biological Process for LOC105375517 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375517 Gene

Drugs & Compounds for LOC105375517 Gene

No Compound Related Data Available

Transcripts for LOC105375517 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375517 Gene

No ASD Table

Relevant External Links for LOC105375517 Gene

GeneLoc Exon Structure for
LOC105375517

No data available for mRNA/cDNA for LOC105375517 Gene

Expression for LOC105375517 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375517 Gene

Orthologs for LOC105375517 Gene

No data available for Orthologs and Evolution for LOC105375517 Gene

Paralogs for LOC105375517 Gene

No data available for Paralogs for LOC105375517 Gene

Variants for LOC105375517 Gene

Sequence variations from dbSNP and Humsavar for LOC105375517 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000544894 -- 134,368,786(-) C/T non_coding_transcript_variant
rs1000689578 -- 134,374,690(-) G/A upstream_transcript_variant
rs1000931774 -- 134,369,119(-) A/G non_coding_transcript_variant
rs1001071962 -- 134,376,088(-) A/T upstream_transcript_variant
rs1001253213 -- 134,369,867(-) A/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375517 Gene

Disorders for LOC105375517 Gene

No disorders were found for LOC105375517 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375517 Gene

Publications for LOC105375517 Gene

No publications were found for LOC105375517 Gene.

Products for LOC105375517 Gene

Sources for LOC105375517 Gene

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