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Aliases for LOC105375508 Gene

Subcategory (RNA class) for LOC105375508 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375508 Gene

  • Uncharacterized LOC105375508 3

External Ids for LOC105375508 Gene

Previous GeneCards Identifiers for LOC105375508 Gene

  • GC07U903937

Summaries for LOC105375508 Gene

GeneCards Summary for LOC105375508 Gene

LOC105375508 (Uncharacterized LOC105375508) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375508 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375508 Gene

Genomics for LOC105375508 Gene

GeneHancer (GH) Regulatory Elements for LOC105375508 Gene

Promoters and enhancers for LOC105375508 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J130733 Promoter/Enhancer 1.3 Ensembl ENCODE 650.7 +0.4 422 1.9 PKNOX1 ARNT SIN3A FEZF1 BMI1 ZNF335 GLIS2 EGR1 ZNF362 ZBTB11 LOC105375508 KLF14 CPA2 GC07P130746
GH07J130740 Enhancer 0.6 Ensembl ENCODE 0.4 +7.2 7161 1.6 CBX8 RNF2 SPI1 KLHDC10 GC07P130746 LOC105375508
GH07J130758 Enhancer 0.6 ENCODE 0.3 +24.4 24385 0.2 CTCF ZNF654 TRIM22 REST RAD21 ZNF592 ZNF766 SMC3 ZNF143 GC07P130746 LOC105375508 ENSG00000271522
GH07J130844 Enhancer 1 FANTOM5 Ensembl ENCODE 0.1 +111.6 111647 3 SIN3A ZC3H11A SP1 ZNF217 JUND GATA3 POLR2A FOSL2 TCF7L2 ENSG00000226380 LOC100133252 GC07P130851 LOC105375508 ENSG00000285106
GH07J130837 Enhancer 0.8 Ensembl ENCODE 0.1 +105.0 104970 2.8 JUN EP300 SP1 MITF JUND POLR2A NFATC1 FOS FOSL2 ENSG00000226380 LOC100133252 LOC105375509 LOC105375508 ENSG00000285106
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375508 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375508 Gene

Genomic Locations for LOC105375508 Gene
chr7:130,734,252-130,862,158
(GRCh38/hg38)
Size:
127,907 bases
Orientation:
Plus strand

Genomic View for LOC105375508 Gene

Genes around LOC105375508 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375508 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375508 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375508 Gene

Proteins for LOC105375508 Gene

Post-translational modifications for LOC105375508 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375508 Gene

Domains & Families for LOC105375508 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375508 Gene

Function for LOC105375508 Gene

Phenotypes From GWAS Catalog for LOC105375508 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375508 Gene

Localization for LOC105375508 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375508 Gene

Pathways & Interactions for LOC105375508 Gene

SuperPathways for LOC105375508 Gene

No Data Available

Interacting Proteins for LOC105375508 Gene

Gene Ontology (GO) - Biological Process for LOC105375508 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375508 Gene

Drugs & Compounds for LOC105375508 Gene

No Compound Related Data Available

Transcripts for LOC105375508 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375508 Gene

No ASD Table

Relevant External Links for LOC105375508 Gene

GeneLoc Exon Structure for
LOC105375508

No data available for mRNA/cDNA for LOC105375508 Gene

Expression for LOC105375508 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375508 Gene

Orthologs for LOC105375508 Gene

No data available for Orthologs and Evolution for LOC105375508 Gene

Paralogs for LOC105375508 Gene

No data available for Paralogs for LOC105375508 Gene

Variants for LOC105375508 Gene

Sequence variations from dbSNP and Humsavar for LOC105375508 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000029761 -- 130,825,188(+) A/C genic_downstream_transcript_variant, intron_variant
rs1000031678 -- 130,741,568(+) G/T intron_variant, non_coding_transcript_variant
rs1000041206 -- 130,818,621(+) A/G genic_downstream_transcript_variant, intron_variant
rs1000043288 -- 130,776,590(+) T/G genic_downstream_transcript_variant, intron_variant
rs1000118010 -- 130,758,730(+) C/T genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375508 Gene

Disorders for LOC105375508 Gene

No disorders were found for LOC105375508 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375508 Gene

Publications for LOC105375508 Gene

No publications were found for LOC105375508 Gene.

Products for LOC105375508 Gene

Sources for LOC105375508 Gene

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