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Aliases for LOC105375504 Gene

Subcategory (RNA class) for LOC105375504 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375504 Gene

  • Uncharacterized LOC105375504 3

External Ids for LOC105375504 Gene

Previous GeneCards Identifiers for LOC105375504 Gene

  • GC07U904106

Summaries for LOC105375504 Gene

GeneCards Summary for LOC105375504 Gene

LOC105375504 (Uncharacterized LOC105375504) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375504 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375504 Gene

Genomics for LOC105375504 Gene

GeneHancer (GH) Regulatory Elements for LOC105375504 Gene

Promoters and enhancers for LOC105375504 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J130362 Enhancer 2 VISTA FANTOM5 Ensembl ENCODE dbSUPER 650.7 -2.0 -1953 12.7 PKNOX1 FOXA2 MLX ARID4B FEZF1 DMAP1 ZNF2 IRF4 YY1 SLC30A9 LOC105375504 CPA5 CPA1 CPA2 MKLN1 MEST CDC26P1 KLHDC10 NRF1 CEP41
GH07J130378 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE dbSUPER 0.4 -13.0 -13043 2.7 CTCF RCOR1 CHD2 NR2F2 CPA1 CPA5 MEST LOC105375504
GH07J130354 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +9.6 9567 5.7 PKNOX1 ZNF133 SIN3A FEZF1 GLI4 ZNF2 FOS KLF13 RXRA YY2 CPA5 MEST NRF1 CPA1 KLHDC10 CPA4 CPA2 COPG2 LOC105375504
GH07J130349 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +15.1 15146 4.5 HDGF PKNOX1 ZFP64 STAT5A BATF IRF4 RAD21 FOS ETV6 IKZF2 CPA5 MEST CDC26P1 CPA1 MKLN1 CPA4 CPA2 NRF1 COPG2 LOC105375504
GH07J130344 Promoter/Enhancer 1.3 EPDnew Ensembl ENCODE 0.3 +21.7 21680 2.5 BCOR ZNF263 ATF1 NRF1 ZMYM3 ZIC2 ATF2 POLR2A ZNF341 CREB1 CPA5 LOC105375503 NRF1 CPA1 CPA4 LOC105375504
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375504 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375504 Gene

Genomic Locations for LOC105375504 Gene
chr7:130,365,650-130,367,127
(GRCh38/hg38)
Size:
1,478 bases
Orientation:
Minus strand

Genomic View for LOC105375504 Gene

Genes around LOC105375504 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375504 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375504 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375504 Gene

Proteins for LOC105375504 Gene

Post-translational modifications for LOC105375504 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375504 Gene

Domains & Families for LOC105375504 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375504 Gene

Function for LOC105375504 Gene

Phenotypes From GWAS Catalog for LOC105375504 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375504 Gene

Localization for LOC105375504 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375504 Gene

Pathways & Interactions for LOC105375504 Gene

SuperPathways for LOC105375504 Gene

No Data Available

Interacting Proteins for LOC105375504 Gene

Gene Ontology (GO) - Biological Process for LOC105375504 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375504 Gene

Drugs & Compounds for LOC105375504 Gene

No Compound Related Data Available

Transcripts for LOC105375504 Gene

mRNA/cDNA for LOC105375504 Gene

(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375504 Gene

No ASD Table

Relevant External Links for LOC105375504 Gene

GeneLoc Exon Structure for
LOC105375504

Expression for LOC105375504 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375504 Gene

Orthologs for LOC105375504 Gene

No data available for Orthologs and Evolution for LOC105375504 Gene

Paralogs for LOC105375504 Gene

No data available for Paralogs for LOC105375504 Gene

Variants for LOC105375504 Gene

Sequence variations from dbSNP and Humsavar for LOC105375504 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1005042155 -- 130,366,539(-) C/T intron_variant
rs1005734337 -- 130,369,066(-) G/A upstream_transcript_variant
rs1006819113 -- 130,366,479(-) C/T intron_variant
rs1010320269 -- 130,366,174(-) C/T intron_variant
rs1010682665 -- 130,365,959(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375504 Gene

Disorders for LOC105375504 Gene

Additional Disease Information for LOC105375504

No disorders were found for LOC105375504 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105375504 Gene

Publications for LOC105375504 Gene

No publications were found for LOC105375504 Gene.

Products for LOC105375504 Gene

Sources for LOC105375504 Gene

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