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Aliases for LOC105375500 Gene

Subcategory (RNA class) for LOC105375500 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375500 Gene

  • Uncharacterized LOC105375500 3

External Ids for LOC105375500 Gene

Previous GeneCards Identifiers for LOC105375500 Gene

  • GC07U903989

Summaries for LOC105375500 Gene

GeneCards Summary for LOC105375500 Gene

LOC105375500 (Uncharacterized LOC105375500) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375500 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375500 Gene

Genomics for LOC105375500 Gene

GeneHancer (GH) Regulatory Elements for LOC105375500 Gene

Promoters and enhancers for LOC105375500 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I129367 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE 0.4 +17.2 17226 2 CLOCK ATF1 ARID2 ZNF207 ZNF143 ATF7 RUNX3 DEK JUNB REST AHCYL2 STRIP2 GC07M129358 LOC105375500
GH07I129344 Enhancer 0.8 ENCODE 0.4 -6.4 -6376 0.1 HDGF PKNOX1 ARNT ZBTB40 BATF IRF4 ATF7 FOS IKZF2 RUNX3 AHCYL2 ENSG00000243230 LOC105375500 GC07M129240
GH07I129331 Enhancer 0.8 Ensembl ENCODE 0.4 -18.2 -18204 1.6 FOSL1 JUND RFX1 JUN FOSL2 FOS PRDM1 FOXA1 AHCYL2 LOC105375500 GC07M129240
GH07I129376 Enhancer 0.8 ENCODE 0.3 +25.7 25684 0.2 CTCF FOXA2 RB1 MAX PAX8 RAD21 ZNF766 FOXK2 ARID2 ZNF143 RNU7-16P AHCYL2 ENSG00000243230 GC07M129358 LOC105375500
GH07I129375 Enhancer 0.7 ENCODE 0.3 +24.5 24547 1 ZNF687 NR2F1 PAX8 DPF2 ZNF592 ZNF217 TARDBP IKZF1 NBN POU5F1 AHCYL2 RNU7-16P STRIP2 ENSG00000243230 GC07M129358 LOC105375500
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375500 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375500 Gene

Genomic Locations for LOC105375500 Gene
chr7:129,350,981-129,352,477
(GRCh38/hg38)
Size:
1,497 bases
Orientation:
Plus strand

Genomic View for LOC105375500 Gene

Genes around LOC105375500 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375500 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375500 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375500 Gene

Proteins for LOC105375500 Gene

Post-translational modifications for LOC105375500 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375500 Gene

Domains & Families for LOC105375500 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375500 Gene

Function for LOC105375500 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375500 Gene

Localization for LOC105375500 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375500 Gene

Pathways & Interactions for LOC105375500 Gene

SuperPathways for LOC105375500 Gene

No Data Available

Interacting Proteins for LOC105375500 Gene

Gene Ontology (GO) - Biological Process for LOC105375500 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375500 Gene

Drugs & Compounds for LOC105375500 Gene

No Compound Related Data Available

Transcripts for LOC105375500 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375500 Gene

No ASD Table

Relevant External Links for LOC105375500 Gene

GeneLoc Exon Structure for
LOC105375500

No data available for mRNA/cDNA for LOC105375500 Gene

Expression for LOC105375500 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375500 Gene

Orthologs for LOC105375500 Gene

No data available for Orthologs and Evolution for LOC105375500 Gene

Paralogs for LOC105375500 Gene

No data available for Paralogs for LOC105375500 Gene

Variants for LOC105375500 Gene

Sequence variations from dbSNP and Humsavar for LOC105375500 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000110999 -- 129,351,754(+) C/T intron_variant
rs1000119532 -- 129,351,730(+) G/A intron_variant
rs1000193425 -- 129,351,370(+) G/A non_coding_transcript_variant
rs1000456242 -- 129,350,033(+) C/T upstream_transcript_variant
rs1000519428 -- 129,349,619(+) T/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375500 Gene

Disorders for LOC105375500 Gene

No disorders were found for LOC105375500 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375500 Gene

Publications for LOC105375500 Gene

No publications were found for LOC105375500 Gene.

Products for LOC105375500 Gene

Sources for LOC105375500 Gene

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