Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105375493 Gene

Subcategory (RNA class) for LOC105375493 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375493 Gene

  • Uncharacterized LOC105375493 3

External Ids for LOC105375493 Gene

Previous GeneCards Identifiers for LOC105375493 Gene

  • GC07U904178

Summaries for LOC105375493 Gene

GeneCards Summary for LOC105375493 Gene

LOC105375493 (Uncharacterized LOC105375493) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375493 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375493 Gene

Genomics for LOC105375493 Gene

GeneHancer (GH) Regulatory Elements for LOC105375493 Gene

Promoters and enhancers for LOC105375493 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J128121 Enhancer 0.7 Ensembl 650.7 +0.5 454 1.8 BRD4 MAX CEBPG ZBTB40 ZBTB48 POLR2A VEZF1 TRIM24 NR2F6 ZBTB20 LOC105375493 LRRC4 SND1 ENSG00000240790 ENSG00000224138 GC07P128208 GC07P128209
GH07J128135 Enhancer 1.1 Ensembl ENCODE 0.4 +14.2 14171 1.7 ATF1 ARNT SIN3A GLIS2 ZNF213 ELK1 ZNF143 ATF7 KDM4B MXD4 ENSG00000230715 ZNF800 ENSG00000243302 ENSG00000242588 ENSG00000243679 ENSG00000224138 SND1 RN7SL81P RPS10P15 ENSG00000229413
GH07J128103 Enhancer 1.1 Ensembl ENCODE 0.4 -17.7 -17696 1.7 MLX ARID4B DMAP1 ZNF48 SLC30A9 PAF1 SP5 NFYC KAT8 NFIL3 SND1 LRRC4 ENSG00000224138 LOC105375493 GC07P128086
GH07J128108 Enhancer 1 Ensembl ENCODE 0.4 -12.8 -12807 1.7 HDGF STAT5A BATF IRF4 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 CREM SND1 LRRC4 ENSG00000240790 LOC105375493 GC07P128086
GH07J128166 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.2 +45.9 45921 2.7 SIN3A GLI4 ZNF2 ETS1 ZNF121 GLIS2 ZNF143 KLF7 KLF13 SP3 LOC100196944 ENSG00000242162 CYCSP20 LOC101928333 FSCN3 RBM28 ENSG00000271553 LRRC4 GC07P128209 GC07P128208
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375493 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375493 Gene

Genomic Locations for LOC105375493 Gene
chr7:128,121,847-128,126,321
(GRCh38/hg38)
Size:
4,475 bases
Orientation:
Plus strand

Genomic View for LOC105375493 Gene

Genes around LOC105375493 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375493 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375493 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375493 Gene

Proteins for LOC105375493 Gene

Post-translational modifications for LOC105375493 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375493 Gene

Domains & Families for LOC105375493 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375493 Gene

Function for LOC105375493 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375493 Gene

Localization for LOC105375493 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375493 Gene

Pathways & Interactions for LOC105375493 Gene

SuperPathways for LOC105375493 Gene

No Data Available

Interacting Proteins for LOC105375493 Gene

Gene Ontology (GO) - Biological Process for LOC105375493 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375493 Gene

Drugs & Compounds for LOC105375493 Gene

No Compound Related Data Available

Transcripts for LOC105375493 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375493 Gene

No ASD Table

Relevant External Links for LOC105375493 Gene

GeneLoc Exon Structure for
LOC105375493

No data available for mRNA/cDNA for LOC105375493 Gene

Expression for LOC105375493 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375493 Gene

Orthologs for LOC105375493 Gene

No data available for Orthologs and Evolution for LOC105375493 Gene

Paralogs for LOC105375493 Gene

No data available for Paralogs for LOC105375493 Gene

Variants for LOC105375493 Gene

Sequence variations from dbSNP and Humsavar for LOC105375493 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000287663 -- 128,124,671(+) A/G intron_variant
rs1000466271 -- 128,122,491(+) G/A/C intron_variant
rs1000516654 -- 128,124,010(+) G/T intron_variant
rs1001121487 -- 128,125,814(+) A/C intron_variant
rs1001913253 -- 128,125,684(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375493 Gene

Disorders for LOC105375493 Gene

No disorders were found for LOC105375493 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375493 Gene

Publications for LOC105375493 Gene

No publications were found for LOC105375493 Gene.

Products for LOC105375493 Gene

Sources for LOC105375493 Gene

Content
Loading form....