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Aliases for LOC105375492 Gene

Subcategory (RNA class) for LOC105375492 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375492 Gene

  • Uncharacterized LOC105375492 3

External Ids for LOC105375492 Gene

Previous GeneCards Identifiers for LOC105375492 Gene

  • GC07U903963

Summaries for LOC105375492 Gene

GeneCards Summary for LOC105375492 Gene

LOC105375492 (Uncharacterized LOC105375492) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375492 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375492 Gene

Genomics for LOC105375492 Gene

GeneHancer (GH) Regulatory Elements for LOC105375492 Gene

Promoters and enhancers for LOC105375492 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I128005 Enhancer 1 ENCODE dbSUPER 0.8 +2.2 2218 1.3 MEIS2 SOX13 TFAP4 TAL1 EBF1 RAD21 RARA YY1 TEAD3 TCF12 SND1 LRRC4 LOC105375492 SND1-IT1
GH07I128003 Enhancer 0.7 Ensembl dbSUPER 0.8 +4.3 4344 0.6 POLR2A ETV6 IRF4 SPI1 LRRC4 SND1 ENSG00000242588 LOC105375492 SND1-IT1
GH07I128004 Enhancer 0.5 dbSUPER 0.8 +3.7 3677 0.7 ELF3 GATA3 FOXA2 RXRA MAX HNF4A FOXA1 LRRC4 SND1 LOC105375492 SND1-IT1
GH07I127994 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +12.2 12206 1.8 HDAC1 TEAD4 TAL1 NRF1 DACH1 CBFA2T3 REST TCF12 HDAC2 IKZF1 SND1-IT1 LRRC4 SND1 LOC105375492 GC07P127895
GH07I127986 Enhancer 1.1 ENCODE dbSUPER 0.3 +21.0 20984 1.1 HDAC1 HDGF PKNOX1 ARNT ZBTB40 TCF12 GATA2 ATF7 CREM ZBTB11 LRRC4 SND1 SND1-IT1 LOC105375492 GC07P127895
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375492 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375492 Gene

Genomic Locations for LOC105375492 Gene
chr7:127,938,214-128,008,045
(GRCh38/hg38)
Size:
69,832 bases
Orientation:
Minus strand

Genomic View for LOC105375492 Gene

Genes around LOC105375492 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375492 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375492 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375492 Gene

Proteins for LOC105375492 Gene

Post-translational modifications for LOC105375492 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375492 Gene

Domains & Families for LOC105375492 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375492 Gene

Function for LOC105375492 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375492 Gene

Localization for LOC105375492 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375492 Gene

Pathways & Interactions for LOC105375492 Gene

SuperPathways for LOC105375492 Gene

No Data Available

Interacting Proteins for LOC105375492 Gene

Gene Ontology (GO) - Biological Process for LOC105375492 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375492 Gene

Drugs & Compounds for LOC105375492 Gene

No Compound Related Data Available

Transcripts for LOC105375492 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375492 Gene

No ASD Table

Relevant External Links for LOC105375492 Gene

GeneLoc Exon Structure for
LOC105375492

No data available for mRNA/cDNA for LOC105375492 Gene

Expression for LOC105375492 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375492 Gene

Orthologs for LOC105375492 Gene

No data available for Orthologs and Evolution for LOC105375492 Gene

Paralogs for LOC105375492 Gene

No data available for Paralogs for LOC105375492 Gene

Variants for LOC105375492 Gene

Sequence variations from dbSNP and Humsavar for LOC105375492 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000024326 -- 127,991,743(-) G/T intron_variant
rs1000040885 -- 127,978,728(-) G/A intron_variant
rs1000105972 -- 127,977,113(-) C/T intron_variant
rs1000129926 -- 127,999,369(-) T/C intron_variant
rs1000217800 -- 127,972,133(-) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375492 Gene

Disorders for LOC105375492 Gene

No disorders were found for LOC105375492 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375492 Gene

Publications for LOC105375492 Gene

No publications were found for LOC105375492 Gene.

Products for LOC105375492 Gene

Sources for LOC105375492 Gene

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