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Aliases for LOC105375463 Gene

Subcategory (RNA class) for LOC105375463 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375463 Gene

  • Uncharacterized LOC105375463 3

External Ids for LOC105375463 Gene

Previous GeneCards Identifiers for LOC105375463 Gene

  • GC07U903842

Summaries for LOC105375463 Gene

GeneCards Summary for LOC105375463 Gene

LOC105375463 (Uncharacterized LOC105375463) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375463 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375463 Gene

Genomics for LOC105375463 Gene

GeneHancer (GH) Regulatory Elements for LOC105375463 Gene

Promoters and enhancers for LOC105375463 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J116284 Enhancer 0.6 ENCODE 650.7 -0.7 -725 0.8 SP1 JUND ATF3 RXRA HNF4G HNF4A YY1 NR2F2 LOC105375463 ENSG00000237813 ENSG00000235427 ENSG00000243220 LOC102724434 TES PIR37927 ENSG00000243243
GH07J116269 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.2 -13193 5.6 FOXA2 NEUROD1 SIN3A BATF FOS RCOR1 CEBPB ELF1 REST GATAD2B ENSG00000235427 ENSG00000243243 ENSG00000243220 TES LOC102724434 CAV1 CAV2 PIR37927 LOC105375463 ENSG00000237813
GH07J116314 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +31.3 31330 5.2 PKNOX1 SIN3A BATF IRF4 RAD21 RFX5 RCOR1 FOS IKZF2 RUNX3 LOC102724434 CAV2 ENSG00000237813 ENSG00000243220 ENSG00000235427 TES ST7 ENSG00000213167 ENSG00000243243 LOC105375463
GH07J116258 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -24.9 -24882 4.4 CTCF IRF2 NFATC3 ARNT JUN ZNF384 RAD21 RFX5 CC2D1A GATA3 CAV1 LOC102724434 CAV2 ENSG00000243243 ENSG00000235427 ENSG00000237813 TFEC ENSG00000243220 TES PIR37927
GH07J116287 Enhancer 0.5 ENCODE 0.7 +3.0 2976 1.8 JUN FOSL2 FOS BATF LOC102724434 CAV2 TES LOC105375463 ENSG00000213167 ENSG00000243243 ENSG00000237813
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375463 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375463 Gene

Genomic Locations for LOC105375463 Gene
chr7:116,285,341-116,349,745
(GRCh38/hg38)
Size:
64,405 bases
Orientation:
Plus strand

Genomic View for LOC105375463 Gene

Genes around LOC105375463 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375463 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375463 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375463 Gene

Proteins for LOC105375463 Gene

Post-translational modifications for LOC105375463 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375463 Gene

Domains & Families for LOC105375463 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375463 Gene

Function for LOC105375463 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375463 Gene

Localization for LOC105375463 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375463 Gene

Pathways & Interactions for LOC105375463 Gene

SuperPathways for LOC105375463 Gene

No Data Available

Interacting Proteins for LOC105375463 Gene

Gene Ontology (GO) - Biological Process for LOC105375463 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375463 Gene

Drugs & Compounds for LOC105375463 Gene

No Compound Related Data Available

Transcripts for LOC105375463 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375463 Gene

No ASD Table

Relevant External Links for LOC105375463 Gene

GeneLoc Exon Structure for
LOC105375463

No data available for mRNA/cDNA for LOC105375463 Gene

Expression for LOC105375463 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375463 Gene

Orthologs for LOC105375463 Gene

No data available for Orthologs and Evolution for LOC105375463 Gene

Paralogs for LOC105375463 Gene

No data available for Paralogs for LOC105375463 Gene

Variants for LOC105375463 Gene

Sequence variations from dbSNP and Humsavar for LOC105375463 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000013358 -- 116,305,569(+) C/T intron_variant
rs1000091506 -- 116,310,753(+) C/T intron_variant
rs1000235978 -- 116,286,356(+) T/G genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000247278 -- 116,284,301(+) A/G upstream_transcript_variant
rs1000249061 -- 116,286,594(+) C/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375463 Gene

Disorders for LOC105375463 Gene

Additional Disease Information for LOC105375463

No disorders were found for LOC105375463 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105375463 Gene

Publications for LOC105375463 Gene

  1. Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions. (PMID: 17567994) Denoeud F … Reymond A (Genome research 2007) 3 58

Products for LOC105375463 Gene

Sources for LOC105375463 Gene

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