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Aliases for LOC105375457 Gene

Subcategory (RNA class) for LOC105375457 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375457 Gene

  • Uncharacterized LOC105375457 3

External Ids for LOC105375457 Gene

Previous GeneCards Identifiers for LOC105375457 Gene

  • GC07U904133

Summaries for LOC105375457 Gene

GeneCards Summary for LOC105375457 Gene

LOC105375457 (Uncharacterized LOC105375457) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375457 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375457 Gene

Genomics for LOC105375457 Gene

GeneHancer (GH) Regulatory Elements for LOC105375457 Gene

Promoters and enhancers for LOC105375457 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J112445 Enhancer 0.8 ENCODE 650.7 -0.1 -115 0.1 SOX13 IRF2 FOXA2 SAP130 ERF CEBPG POLR2A NR2F6 HOMEZ THAP11 LOC105375457 ENSG00000180019 LSMEM1 IFRD1
GH07J112421 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE 0.3 +22.3 22333 2.7 HDGF CLOCK ARNT ARID4B NEUROD1 SIN3A DMAP1 SLC30A9 ZNF766 FOS IFRD1 GC07P112424 DOCK4 SMIM30 ZNF277 LOC105375457
GH07J112420 Enhancer 0.9 Ensembl ENCODE 0.3 +24.7 24736 0.9 SOX5 GATAD2A SOX13 FOXA2 SAP130 TEAD1 FOXA3 MNT DMAP1 SKI LSMEM1 IFRD1 LOC105375456 LOC105375457
GH07J112434 Enhancer 0.6 ENCODE 0.4 +10.2 10152 0.9 RFX1 JUN ATF2 SP1 JUND POLR2A FOS FOSL2 RCOR1 CHD2 LSMEM1 LOC105375457 GC07P112424 IFRD1
GH07J112398 Enhancer 0.6 ENCODE 0.2 +46.6 46635 1.1 ATF1 SOX6 BHLHE40 CBFA2T3 ZIC2 MITF CTBP1 GATA2 POLR2A GLIS1 LOC105375456 MTCYBP24 LOC105375457
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375457 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375457 Gene

Genomic Locations for LOC105375457 Gene
chr7:112,399,042-112,445,306
(GRCh38/hg38)
Size:
46,265 bases
Orientation:
Minus strand

Genomic View for LOC105375457 Gene

Genes around LOC105375457 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375457 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375457 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375457 Gene

Proteins for LOC105375457 Gene

Post-translational modifications for LOC105375457 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375457 Gene

Domains & Families for LOC105375457 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375457 Gene

Function for LOC105375457 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375457 Gene

Localization for LOC105375457 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375457 Gene

Pathways & Interactions for LOC105375457 Gene

SuperPathways for LOC105375457 Gene

No Data Available

Interacting Proteins for LOC105375457 Gene

Gene Ontology (GO) - Biological Process for LOC105375457 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375457 Gene

Drugs & Compounds for LOC105375457 Gene

No Compound Related Data Available

Transcripts for LOC105375457 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375457 Gene

No ASD Table

Relevant External Links for LOC105375457 Gene

GeneLoc Exon Structure for
LOC105375457

No data available for mRNA/cDNA for LOC105375457 Gene

Expression for LOC105375457 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375457 Gene

Orthologs for LOC105375457 Gene

No data available for Orthologs and Evolution for LOC105375457 Gene

Paralogs for LOC105375457 Gene

No data available for Paralogs for LOC105375457 Gene

Variants for LOC105375457 Gene

Sequence variations from dbSNP and Humsavar for LOC105375457 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000171436 -- 112,446,691(-) C/T upstream_transcript_variant
rs1000347266 -- 112,429,691(-) G/A genic_downstream_transcript_variant, non_coding_transcript_variant
rs1000485086 -- 112,436,588(-) C/T genic_downstream_transcript_variant, intron_variant
rs1000814803 -- 112,436,318(-) C/T genic_downstream_transcript_variant, intron_variant
rs1001335417 -- 112,445,117(-) AGTGCAGTG/AGTGCAGTGCAGTG genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375457 Gene

Disorders for LOC105375457 Gene

No disorders were found for LOC105375457 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375457 Gene

Publications for LOC105375457 Gene

No publications were found for LOC105375457 Gene.

Products for LOC105375457 Gene

Sources for LOC105375457 Gene

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