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Aliases for LOC105375451 Gene

Subcategory (RNA class) for LOC105375451 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105375451 Gene

  • Uncharacterized LOC105375451 3
  • AC092167.1 5

External Ids for LOC105375451 Gene

Previous GeneCards Identifiers for LOC105375451 Gene

  • GC07U904310

Summaries for LOC105375451 Gene

GeneCards Summary for LOC105375451 Gene

LOC105375451 (Uncharacterized LOC105375451) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375451 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375451 Gene

Genomics for LOC105375451 Gene

GeneHancer (GH) Regulatory Elements for LOC105375451 Gene

Promoters and enhancers for LOC105375451 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I110533 Enhancer 1.1 Ensembl ENCODE dbSUPER 570.1 +0.1 140 1.9 CTCF PKNOX1 NFIB ZNF335 E2F1 GATA3 GLIS2 ZNF366 PRDM10 NFE2 LOC105375451 GC07P110533 GC07P110534 GC07P110535
GH07I110521 Enhancer 1.3 Ensembl ENCODE dbSUPER 15 +12.2 12232 1.8 PKNOX1 FOXA2 MLX ARID4B NEUROD1 YY1 TCF12 ATF7 RXRA SP5 LOC105375451 GC07P110535 GC07M110481
GH07I110500 Enhancer 0.4 dbSUPER 18.4 +29.8 29756 8.1 ATF7 HNF4A RAD21 LOC105375451 GC07M110481 GC07P110535
GH07I110541 Enhancer 0.3 ENCODE 20.2 -7.5 -7461 2.3 FOXA1 LOC105375451 GC07P110533 GC07P110534 GC07P110535 LOC105375452
GH07I110531 Enhancer 0.4 ENCODE dbSUPER 0.8 +3.3 3260 1 GC07P110535 LOC105375451 GC07M110481
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375451 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375451 Gene

Genomic Locations for LOC105375451 Gene
chr7:110,432,239-110,534,754
(GRCh38/hg38)
Size:
102,516 bases
Orientation:
Minus strand
chr7:110,072,296-110,174,811
(GRCh37/hg19)

Genomic View for LOC105375451 Gene

Genes around LOC105375451 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375451 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375451 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375451 Gene

Proteins for LOC105375451 Gene

Post-translational modifications for LOC105375451 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375451 Gene

Domains & Families for LOC105375451 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375451 Gene

Function for LOC105375451 Gene

Phenotypes From GWAS Catalog for LOC105375451 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375451 Gene

Localization for LOC105375451 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375451 Gene

Pathways & Interactions for LOC105375451 Gene

SuperPathways for LOC105375451 Gene

No Data Available

Interacting Proteins for LOC105375451 Gene

Gene Ontology (GO) - Biological Process for LOC105375451 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375451 Gene

Drugs & Compounds for LOC105375451 Gene

No Compound Related Data Available

Transcripts for LOC105375451 Gene

mRNA/cDNA for LOC105375451 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375451 Gene

No ASD Table

Relevant External Links for LOC105375451 Gene

GeneLoc Exon Structure for
LOC105375451

Expression for LOC105375451 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375451 Gene

Orthologs for LOC105375451 Gene

Evolution for LOC105375451 Gene

ENSEMBL:
Gene Tree for LOC105375451 (if available)
TreeFam:
Gene Tree for LOC105375451 (if available)

No data available for Orthologs for LOC105375451 Gene

Paralogs for LOC105375451 Gene

No data available for Paralogs for LOC105375451 Gene

Variants for LOC105375451 Gene

Sequence variations from dbSNP and Humsavar for LOC105375451 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000012330 -- 110,510,702(-) G/A intron_variant
rs1000029629 -- 110,473,840(-) G/A intron_variant
rs1000053484 -- 110,396,643(-) C/A/T genic_downstream_transcript_variant, intron_variant
rs1000055363 -- 110,460,817(-) G/A intron_variant
rs1000060410 -- 110,623,476(-) T/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375451 Gene

Disorders for LOC105375451 Gene

No disorders were found for LOC105375451 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375451 Gene

Publications for LOC105375451 Gene

No publications were found for LOC105375451 Gene.

Products for LOC105375451 Gene

Sources for LOC105375451 Gene

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