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Aliases for LOC105375446 Gene

Subcategory (RNA class) for LOC105375446 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375446 Gene

  • Uncharacterized LOC105375446 3

External Ids for LOC105375446 Gene

Previous GeneCards Identifiers for LOC105375446 Gene

  • GC07U904136

Summaries for LOC105375446 Gene

GeneCards Summary for LOC105375446 Gene

LOC105375446 (Uncharacterized LOC105375446) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375446 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375446 Gene

Genomics for LOC105375446 Gene

GeneHancer (GH) Regulatory Elements for LOC105375446 Gene

Promoters and enhancers for LOC105375446 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J108077 Enhancer 1.2 Ensembl ENCODE 0.7 -4.4 -4416 3.9 HDGF PKNOX1 ARNT ARID4B DMAP1 ZNF48 ZNF280A TCF12 GATA2 FOS LAMB4 LOC105375446 GC07P108054
GH07J108088 Enhancer 0.5 ENCODE 0.7 +4.7 4660 0.2 GATA3 IKZF1 TAL1 CBFA2T3 PRDM10 LAMB4 LOC105375446 PIR53493
GH07J108090 Enhancer 0.8 ENCODE 0.4 +6.7 6700 0.2 HDAC1 ATF1 ARNT ZBTB40 NCOA2 CHAMP1 TCF12 ATF7 ZBTB2 CEBPB LAMB4 PIR53493 LOC105375446
GH07J108055 Enhancer 0.7 ENCODE 0.3 -28.5 -28520 0.2 SOX13 ERF CEBPG ZNF644 RBPJ RARA TEAD3 ZNF614 RERE RCOR1 GC07P108054 LAMB4 LOC105375446
GH07J108057 Enhancer 0.2 ENCODE 0.3 -25.2 -25179 3.8 LAMB4 CBLL1 GC07P108054 LOC105375446
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375446 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375446 Gene

Genomic Locations for LOC105375446 Gene
chr7:108,084,271-108,091,374
(GRCh38/hg38)
Size:
7,104 bases
Orientation:
Plus strand

Genomic View for LOC105375446 Gene

Genes around LOC105375446 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375446 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375446 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375446 Gene

Proteins for LOC105375446 Gene

Post-translational modifications for LOC105375446 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375446 Gene

Domains & Families for LOC105375446 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375446 Gene

Function for LOC105375446 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375446 Gene

Localization for LOC105375446 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375446 Gene

Pathways & Interactions for LOC105375446 Gene

SuperPathways for LOC105375446 Gene

No Data Available

Interacting Proteins for LOC105375446 Gene

Gene Ontology (GO) - Biological Process for LOC105375446 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375446 Gene

Drugs & Compounds for LOC105375446 Gene

No Compound Related Data Available

Transcripts for LOC105375446 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375446 Gene

No ASD Table

Relevant External Links for LOC105375446 Gene

GeneLoc Exon Structure for
LOC105375446

No data available for mRNA/cDNA for LOC105375446 Gene

Expression for LOC105375446 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375446 Gene

Orthologs for LOC105375446 Gene

No data available for Orthologs and Evolution for LOC105375446 Gene

Paralogs for LOC105375446 Gene

No data available for Paralogs for LOC105375446 Gene

Variants for LOC105375446 Gene

Sequence variations from dbSNP and Humsavar for LOC105375446 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000651298 -- 108,088,731(+) T/C intron_variant
rs1001109931 -- 108,083,346(+) G/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1001331451 -- 108,078,775(+) A/C upstream_transcript_variant
rs1002186507 -- 108,082,425(+) T/C genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1002255554 -- 108,082,779(+) A/G genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375446 Gene

Disorders for LOC105375446 Gene

No disorders were found for LOC105375446 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375446 Gene

Publications for LOC105375446 Gene

No publications were found for LOC105375446 Gene.

Products for LOC105375446 Gene

Sources for LOC105375446 Gene

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