Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105375433 Gene

Subcategory (RNA class) for LOC105375433 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105375433 Gene

  • Uncharacterized LOC105375433 3

External Ids for LOC105375433 Gene

Previous GeneCards Identifiers for LOC105375433 Gene

  • GC07U903877

Summaries for LOC105375433 Gene

GeneCards Summary for LOC105375433 Gene

LOC105375433 (Uncharacterized LOC105375433) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375433 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375433 Gene

Genomics for LOC105375433 Gene

GeneHancer (GH) Regulatory Elements for LOC105375433 Gene

Promoters and enhancers for LOC105375433 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J102419 Enhancer 1.3 Ensembl ENCODE dbSUPER 650.7 +0.6 630 2.8 PKNOX1 ARNT TCF12 ZNF766 GATA2 ATF7 CAVIN1 NCOA1 ZNF592 MBD2 LOC105375433 ORAI2 ENSG00000272949 LRWD1 ALKBH4 DNAJC2 RASA4B CRYZP1 MIR548O LOC100630923
GH07J102414 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +4.3 4307 4.4 HDGF NFIB BACH1 EBF1 BATF ZNF316 GATA3 POLR2A EED IKZF2 ORAI2 LRWD1 ALKBH4 POLR2J ENSG00000272949 PRKRIP1 LOC105375433 MIR548O LOC100630923
GH07J102407 Enhancer 0.9 ENCODE dbSUPER 0.4 +12.6 12612 1.9 HDGF BCOR ZMYM3 EBF1 RBBP5 BMI1 ZNF121 EED ZNF207 ATF7 ORAI2 ENSG00000272949 RASA4DP MIR548O LOC105375433 LOC100630923 PRKRIP1
GH07J102412 Enhancer 0.8 ENCODE dbSUPER 0.4 +8.6 8571 0.2 CTCF REST RAD21 NFIC IKZF1 ZNF143 ZBTB33 RUNX3 ALKBH4 LRWD1 LOC105375433 MIR548O LOC100630923 PRKRIP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105375433 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105375433 Gene

Genomic Locations for LOC105375433 Gene
chr7:102,407,507-102,421,280
(GRCh38/hg38)
Size:
13,774 bases
Orientation:
Minus strand

Genomic View for LOC105375433 Gene

Genes around LOC105375433 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375433 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375433 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375433 Gene

Proteins for LOC105375433 Gene

Post-translational modifications for LOC105375433 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375433 Gene

Domains & Families for LOC105375433 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375433 Gene

Function for LOC105375433 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375433 Gene

Localization for LOC105375433 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375433 Gene

Pathways & Interactions for LOC105375433 Gene

SuperPathways for LOC105375433 Gene

No Data Available

Interacting Proteins for LOC105375433 Gene

Gene Ontology (GO) - Biological Process for LOC105375433 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375433 Gene

Drugs & Compounds for LOC105375433 Gene

No Compound Related Data Available

Transcripts for LOC105375433 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375433 Gene

No ASD Table

Relevant External Links for LOC105375433 Gene

GeneLoc Exon Structure for
LOC105375433

No data available for mRNA/cDNA for LOC105375433 Gene

Expression for LOC105375433 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375433 Gene

Orthologs for LOC105375433 Gene

No data available for Orthologs and Evolution for LOC105375433 Gene

Paralogs for LOC105375433 Gene

No data available for Paralogs for LOC105375433 Gene

Variants for LOC105375433 Gene

Sequence variations from dbSNP and Humsavar for LOC105375433 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1001735057 -- 102,411,973(-) C/T intron_variant
rs1001764717 -- 102,411,728(-) T/G intron_variant
rs1002065419 -- 102,410,372(-) G/T intron_variant
rs1002096662 -- 102,410,070(-) C/G/T intron_variant
rs1002134645 -- 102,417,056(-) T/C genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105375433 Gene

Disorders for LOC105375433 Gene

No disorders were found for LOC105375433 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375433 Gene

Publications for LOC105375433 Gene

No publications were found for LOC105375433 Gene.

Products for LOC105375433 Gene

Sources for LOC105375433 Gene

Content
Loading form....